RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 Q3ZCU0 254 aa16.49■□□□□ 0.23
PSEN1-225ENST00000560005 C5orf24Q7Z6I8 188 aa16.49■□□□□ 0.23
PSEN1-225ENST00000560005 OR11H7Q8NGC8 314 aa16.49■□□□□ 0.23
PSEN1-225ENST00000560005 OR52L2PQ8NGH6 319 aa16.49■□□□□ 0.23
PSEN1-225ENST00000560005 RFESDQ8TAC1 157 aa16.49■□□□□ 0.23
PSEN1-225ENST00000560005 H1FXQ92522 213 aaKnown RBP16.49■□□□□ 0.23
PSEN1-225ENST00000560005 DCTN5Q9BTE1 182 aa16.49■□□□□ 0.23
PSEN1-225ENST00000560005 RANBP3Q9H6Z4 567 aaPredicted RBP16.49■□□□□ 0.23
PSEN1-225ENST00000560005 IDI2-AS1Q9NZ38 188 aa16.49■□□□□ 0.23
PSEN1-225ENST00000560005 IGKV1D-13A0A0B4J2D9 117 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 SNAPC5O75971 98 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 OR8U9P0C7N5 309 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 IGKV1-13P0DP09 117 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 CD28P10747 220 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 RAP2BP61225 183 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 SUPT4H1P63272 117 aaKnown RBP16.48■□□□□ 0.23
PSEN1-225ENST00000560005 C17orf58Q2M2W7 97 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 MORN2Q502X0 79 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 PHLDA2Q53GA4 152 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 OR4F17Q8NGA8 305 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 OR8U1Q8NH10 309 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 C17orf50Q8WW18 174 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 DMRTB1Q96MA1 342 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 ZNF714Q96N38 554 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 OR4F4Q96R69 305 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 RANGRFQ9HD47 186 aaPredicted RBP16.48■□□□□ 0.23
PSEN1-225ENST00000560005 RAB18Q9NP72 206 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 CCL28Q9NRJ3 127 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 GFOD1Q9NXC2 390 aa16.48■□□□□ 0.23
PSEN1-225ENST00000560005 OR2A4O95047 310 aa16.47■□□□□ 0.23
PSEN1-225ENST00000560005 UBE2E1P51965 193 aa16.47■□□□□ 0.23
PSEN1-225ENST00000560005 CYCSP99999 105 aaKnown RBP16.47■□□□□ 0.23
PSEN1-225ENST00000560005 ZNF818PQ6ZRF7 136 aa16.47■□□□□ 0.23
PSEN1-225ENST00000560005 ZNF645Q8N7E2 425 aa16.47■□□□□ 0.23
PSEN1-225ENST00000560005 TCTEX1D1Q8N7M0 179 aa16.47■□□□□ 0.23
PSEN1-225ENST00000560005 UBALD1Q8TB05 177 aa16.47■□□□□ 0.23
PSEN1-225ENST00000560005 OR2A7Q96R45 310 aa16.47■□□□□ 0.23
PSEN1-225ENST00000560005 C3orf85A0A1B0GTC6 90 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 hCG_1809904A0A1W2PP81 198 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 A0A1W2PPE2 198 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 A0A1W2PR64 198 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 A0A1W2PRV1 198 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 HSD17B6O14756 317 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 IFNA21P01568 189 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 IGLL1P15814 213 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 CXCL3P19876 107 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 PPP1CCP36873 323 aaKnown RBP16.46■□□□□ 0.23
PSEN1-225ENST00000560005 ZFP69Q49AA0 526 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 TMEM200BQ69YZ2 307 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 HEPN1Q6WQI6 88 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 LGI3Q8N145 548 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 LRTM2Q8N967 370 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 WWC2-AS2Q96NR7 200 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 GAB2Q9UQC2 676 aa16.46■□□□□ 0.23
PSEN1-225ENST00000560005 DBX1A6NMT0 343 aa16.45■□□□□ 0.22
PSEN1-225ENST00000560005 GOSR2O14653 212 aa16.45■□□□□ 0.22
PSEN1-225ENST00000560005 NCR3LG1Q68D85 454 aa16.45■□□□□ 0.22
PSEN1-225ENST00000560005 TBC1D26Q86UD7 250 aa16.45■□□□□ 0.22
PSEN1-225ENST00000560005 NDUFA11Q86Y39 141 aa16.45■□□□□ 0.22
PSEN1-225ENST00000560005 OR5M8Q8NGP6 311 aa16.45■□□□□ 0.22
PSEN1-225ENST00000560005 C8orf46Q8TAG6 207 aa16.45■□□□□ 0.22
PSEN1-225ENST00000560005 CITED2Q99967 270 aaPredicted RBP16.45■□□□□ 0.22
PSEN1-225ENST00000560005 NPFFR1Q9GZQ6 430 aa16.45■□□□□ 0.22
PSEN1-225ENST00000560005 C19orf12Q9NSK7 152 aa16.45■□□□□ 0.22
PSEN1-225ENST00000560005 DUXBA0A1W2PPF3 345 aa16.44■□□□□ 0.22
PSEN1-225ENST00000560005 ADARB2-AS1A8MUL3 147 aa16.44■□□□□ 0.22
PSEN1-225ENST00000560005 CHST1O43916 411 aa16.44■□□□□ 0.22
PSEN1-225ENST00000560005 PGLYRP1O75594 196 aaPredicted RBP16.44■□□□□ 0.22
PSEN1-225ENST00000560005 C1QBP02746 253 aa16.44■□□□□ 0.22
PSEN1-225ENST00000560005 RBP4P02753 201 aa16.44■□□□□ 0.22
PSEN1-225ENST00000560005 PAX6P26367 422 aa16.44■□□□□ 0.22
PSEN1-225ENST00000560005 CATR1Q13166 79 aa16.44■□□□□ 0.22
PSEN1-225ENST00000560005 HABP2Q14520 560 aaPredicted RBP16.44■□□□□ 0.22
PSEN1-225ENST00000560005 TMEM187Q14656 261 aa16.44■□□□□ 0.22
PSEN1-225ENST00000560005 LRRC75BQ2VPJ9 315 aa16.44■□□□□ 0.22
PSEN1-225ENST00000560005 DEFB121Q5J5C9 76 aa16.44■□□□□ 0.22
PSEN1-225ENST00000560005 GSG1LQ6UXU4 331 aa16.44■□□□□ 0.22
PSEN1-225ENST00000560005 LIAT1Q6ZQX7 453 aa16.44■□□□□ 0.22
PSEN1-225ENST00000560005 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.44■□□□□ 0.22
PSEN1-225ENST00000560005 FYTTD1Q96QD9 318 aaKnown RBP16.44■□□□□ 0.22
PSEN1-225ENST00000560005 FAM212BQ9NTI7 297 aaPredicted RBP16.44■□□□□ 0.22
PSEN1-225ENST00000560005 H0Y980 276 aa16.43■□□□□ 0.22
PSEN1-225ENST00000560005 OR5AC1P0C628 307 aa16.43■□□□□ 0.22
PSEN1-225ENST00000560005 CD33P20138 364 aa16.43■□□□□ 0.22
PSEN1-225ENST00000560005 F2RP25116 425 aa16.43■□□□□ 0.22
PSEN1-225ENST00000560005 EIF2B2P49770 351 aaKnown RBP16.43■□□□□ 0.22
PSEN1-225ENST00000560005 FGL1Q08830 312 aa16.43■□□□□ 0.22
PSEN1-225ENST00000560005 ZNF66Q6ZN08 573 aa16.43■□□□□ 0.22
PSEN1-225ENST00000560005 TCF23Q7RTU1 214 aa16.43■□□□□ 0.22
PSEN1-225ENST00000560005 IL22RA2Q969J5 263 aa16.43■□□□□ 0.22
PSEN1-225ENST00000560005 HYLS1Q96M11 299 aa16.43■□□□□ 0.22
PSEN1-225ENST00000560005 HSD17B10Q99714 261 aaKnown RBP16.43■□□□□ 0.22
PSEN1-225ENST00000560005 TMEM222Q9H0R3 208 aa16.43■□□□□ 0.22
PSEN1-225ENST00000560005 OR2D2Q9H210 308 aa16.43■□□□□ 0.22
PSEN1-225ENST00000560005 METTL8Q9H825 291 aaKnown RBP16.43■□□□□ 0.22
PSEN1-225ENST00000560005 SERTAD4Q9NUC0 356 aa16.43■□□□□ 0.22
PSEN1-225ENST00000560005 LIN7CQ9NUP9 197 aaKnown RBP16.43■□□□□ 0.22
PSEN1-225ENST00000560005 IGHV3-43A0A0B4J1X8 118 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 IGHV3-43DP0DP04 118 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 GPR12P47775 334 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms