RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 RAB9BQ9NP90 201 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 SMCO4Q9NRQ5 59 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 CLN8Q9UBY8 286 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 TRAV1-1A0A0B4J248 108 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 OR13C7P0DN81 318 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 CGB3P0DN86 165 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 CGB7P0DN87 165 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 PTAFRP25105 342 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 SERF2P84101 59 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 RBPJQ06330 500 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 AKIRIN2Q53H80 203 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 ETV3LQ6ZN32 361 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 DTD1Q8TEA8 209 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 R3HDM4Q96D70 268 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 CIB3Q96Q77 187 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 IFI27L2Q9H2X8 130 aa11.98□□□□□ -0.49
RABGGTA-212ENST00000559974 UBE2L5PA0A1B0GUS4 154 aa11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 M0R1X1 148 aa11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 ZG16O60844 167 aa11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 RBMXL2O75526 392 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 CYB5R3P00387 301 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 HPRT1P00492 218 aa11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 ZNF134P52741 427 aa11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 FLI1Q01543 452 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 HAGHQ16775 308 aa11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 C17orf58Q2M2W7 97 aa11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 SOHLH1Q5JUK2 328 aa11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 WFDC8Q8IUA0 241 aa11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 RPS10P5Q9NQ39 176 aa11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 RPRMQ9NS64 109 aa11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 JKAMPQ9P055 326 aa11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 YLPM1P49750 1951 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-212ENST00000559974 M0R036 132 aa11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 CCL21O00585 134 aa11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 ITGB1BP1O14713 200 aa11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 FCGR3BO75015 233 aa11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 CTRB1P17538 263 aa11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 ADORA2A-AS1P86434 159 aa11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 ATP6V1FQ16864 119 aa11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 RPL39P5Q59GN2 51 aa11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 ZNF506Q5JVG8 444 aa11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 CTRB2Q6GPI1 263 aa11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 TET2Q6N021 2002 aaPredicted RBP11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 CLDND2Q8NHS1 167 aa11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 TAF15Q92804 592 aaKnown RBP eCLIP11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 ZDHHC16Q969W1 377 aa11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 GAFA1Q96PS6 74 aa11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 AIFM2Q9BRQ8 373 aa11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 UNKLQ9H9P5 680 aaKnown RBP11.96□□□□□ -0.49
RABGGTA-212ENST00000559974 KBTBD11-OT1A0A1B0GTJ5 212 aa11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 C7orf77A4D0Y5 90 aa11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 DPRXA6NFQ7 191 aa11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 FAM90A9PA6NNJ1 464 aa11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 RBFOX2O43251 390 aaKnown RBP eCLIP11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 SCAF4O95104 1147 aaKnown RBP11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 SNRNP70P08621 437 aaKnown RBP11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 IRF2P14316 349 aa11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 PAX6P26367 422 aa11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 AKR1C3P42330 323 aa11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 RAB7AP51149 207 aa11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 ICAM4Q14773 271 aa11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 DUX4L9Q6RFH8 374 aaPredicted RBP11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 FAM234AQ9H0X4 552 aa11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 VSIRQ9H7M9 311 aa11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 ZNF665Q9H7R5 613 aa11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 GFOD1Q9NXC2 390 aa11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 TIMM9Q9Y5J7 89 aa11.96□□□□□ -0.5
RABGGTA-212ENST00000559974 TRGV10A0A0A0MS01 117 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 PMS2P5A8MQ11 134 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 CEBPZOSA8MTT3 80 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 IGHV3-7P01780 117 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 HSPB1P04792 205 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 SRP19P09132 144 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 RHEBQ15382 184 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 TMEM41BQ5BJD5 291 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 ZNF788Q6ZQV5 615 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 SSX8Q7RTT4 187 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 DEFB108BQ8NET1 73 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 RXFP4Q8TDU9 374 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 MBD3L1Q8WWY6 194 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 PINX1Q96BK5 328 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 C20orf24Q9BUV8 137 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 TMEM147Q9BVK8 224 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 MLXQ9UH92 298 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 GAB2Q9UQC2 676 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 PRELID3BQ9Y3B1 194 aa11.95□□□□□ -0.5
RABGGTA-212ENST00000559974 COLCA2A8K830 154 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 SLC31A2O15432 143 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 THBDP07204 575 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 OR9G9P0C7N8 305 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 KIR2DS2P43631 304 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 BSPH1Q075Z2 132 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 ADIPOQQ15848 244 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 ZNF726P1Q15940 193 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 AARDQ4LEZ3 155 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 TEX36Q5VZQ5 186 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 C15orf54Q8N8G6 183 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 OR10P1Q8NGE3 313 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 CLCC1Q96S66 551 aa11.94□□□□□ -0.5
RABGGTA-212ENST00000559974 DIRC2Q96SL1 478 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms