RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 BCL6BQ8N143 479 aaPredicted RBP8.41□□□□□ -1.06
TPM1-221ENST00000559831 LGI3Q8N145 548 aa8.41□□□□□ -1.06
TPM1-221ENST00000559831 OR5AN1Q8NGI8 311 aa8.41□□□□□ -1.06
TPM1-221ENST00000559831 OR4S2Q8NH73 311 aa8.41□□□□□ -1.06
TPM1-221ENST00000559831 RNASE11Q8TAA1 199 aaKnown RBP8.41□□□□□ -1.06
TPM1-221ENST00000559831 GLYATL2Q8WU03 294 aa8.41□□□□□ -1.06
TPM1-221ENST00000559831 AKAP9Q99996 3911 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 TLN2Q9Y4G6 2542 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 MDFIC2A0A1B0GVS7 189 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 SNRNP70P08621 437 aaKnown RBP8.4□□□□□ -1.06
TPM1-221ENST00000559831 HOXB5P09067 269 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 FBP1P09467 338 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 FOSL1P15407 271 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 RPA2P15927 270 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 CD24P25063 80 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 BRS3P32247 399 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 MC5RP33032 325 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 RAB13P51153 203 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 BPIFB3P59826 476 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 RPS16P62249 146 aaKnown RBP8.4□□□□□ -1.06
TPM1-221ENST00000559831 SRPXP78539 464 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 HES1Q14469 280 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 ZNF585BQ52M93 769 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 Q71RC1 249 aaPredicted RBP8.4□□□□□ -1.06
TPM1-221ENST00000559831 PDPNQ86YL7 162 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 SELENOHQ8IZQ5 122 aaKnown RBP8.4□□□□□ -1.06
TPM1-221ENST00000559831 TCTEX1D1Q8N7M0 179 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 LHFPL5Q8TAF8 219 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 CD300LFQ8TDQ1 290 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 MITD1Q8WV92 249 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 CFHR4Q92496 578 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 MED28Q9H204 178 aa8.4□□□□□ -1.06
TPM1-221ENST00000559831 ZNF469Q96JG9 3925 aaPredicted RBP8.4□□□□□ -1.07
TPM1-221ENST00000559831 ZANQ9Y493 2812 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 A0A0B4J2A0 478 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 CCSO14618 274 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 GOSR2O14653 212 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 SHOXO15266 292 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 RBFOX2O43251 390 aaKnown RBP eCLIP8.39□□□□□ -1.07
TPM1-221ENST00000559831 VENTXO95231 258 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 CDS2O95674 445 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 HPRT1P00492 218 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 IGKV1D-33P01593 117 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 IGKV1-33P01594 117 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 IGKV1-39P01597 117 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 IGKV1-16P04430 117 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 IGKV1D-39P04432 117 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 CD1BP29016 333 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 G6PCP35575 357 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 AKR1C2P52895 323 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 ERVK-16P61578 105 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 HNF4GQ14541 408 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 LRRC75BQ2VPJ9 315 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 DEFB112Q30KQ8 113 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 DHRS7BQ6IAN0 325 aaPredicted RBP8.39□□□□□ -1.07
TPM1-221ENST00000559831 SSX9Q7RTT3 188 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 LYZL2Q7Z4W2 148 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 SLC35G3Q8N808 338 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 RBPMSQ93062 196 aaKnown RBP8.39□□□□□ -1.07
TPM1-221ENST00000559831 ZDHHC16Q969W1 377 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 FLYWCH2Q96CP2 140 aaKnown RBP8.39□□□□□ -1.07
TPM1-221ENST00000559831 R3HDM4Q96D70 268 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 TMEM56Q96MV1 263 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 GSX1Q9H4S2 264 aaPredicted RBP8.39□□□□□ -1.07
TPM1-221ENST00000559831 SHPKQ9UHJ6 478 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 TMEM56-RWDD3S4R434 201 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 TEX15Q9BXT5 2789 aa8.39□□□□□ -1.07
TPM1-221ENST00000559831 FAM25EA8MYX2 175 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 ADAP1O75689 374 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 ATG12O94817 140 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 KRASP01116 189 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 IFNA21P01568 189 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 TMEM11P17152 192 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 FCN2Q15485 313 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 TMEM177Q53S58 311 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 VKORC1L1Q8N0U8 176 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 DMBX1Q8NFW5 382 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 OR4C13Q8NGP0 309 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 OR2T10Q8NGZ9 312 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 IL22RA2Q969J5 263 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 RITA1Q96K30 269 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 HARBI1Q96MB7 349 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 SSX3Q99909 188 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 MEGF9Q9H1U4 602 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 PLEKHA2Q9HB19 425 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 FAM212BQ9NTI7 297 aaPredicted RBP8.38□□□□□ -1.07
TPM1-221ENST00000559831 COMMD9Q9P000 198 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 MGAT4CQ9UBM8 478 aa8.38□□□□□ -1.07
TPM1-221ENST00000559831 SONP18583 2426 aaKnown RBP8.37□□□□□ -1.07
TPM1-221ENST00000559831 C13orf42A0A1B0GVH6 325 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 C5orf51A6NDU8 294 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 SIX6O95475 246 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 MOSP00540 346 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 HRASP01112 189 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 IGKV1-5P01602 117 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 FAM106CPP0CH98 169 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 NQO2P16083 231 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 CNTFRP26992 372 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 RRAS2P62070 204 aaPredicted RBP8.37□□□□□ -1.07
TPM1-221ENST00000559831 HABP2Q14520 560 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms