RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 KIAA1109Q2LD37 5005 aa8.04□□□□□ -1.12
TRAF3-207ENST00000559734 MSGN1A6NI15 193 aa8.04□□□□□ -1.12
TRAF3-207ENST00000559734 FAM90A7PA6NKC0 464 aa8.04□□□□□ -1.12
TRAF3-207ENST00000559734 GLAP06280 429 aa8.04□□□□□ -1.12
TRAF3-207ENST00000559734 OR9G9P0C7N8 305 aa8.04□□□□□ -1.12
TRAF3-207ENST00000559734 APOC4P55056 127 aa8.04□□□□□ -1.12
TRAF3-207ENST00000559734 WFDC3Q8IUB2 231 aa8.04□□□□□ -1.12
TRAF3-207ENST00000559734 CDH26Q8IXH8 852 aa8.04□□□□□ -1.12
TRAF3-207ENST00000559734 NKAIN3Q8N8D7 197 aa8.04□□□□□ -1.12
TRAF3-207ENST00000559734 ADAD2Q8NCV1 583 aaKnown RBP8.04□□□□□ -1.12
TRAF3-207ENST00000559734 HARBI1Q96MB7 349 aa8.04□□□□□ -1.12
TRAF3-207ENST00000559734 NEDD4LQ96PU5 975 aa8.04□□□□□ -1.12
TRAF3-207ENST00000559734 C11orf54Q9H0W9 315 aaPredicted RBP8.04□□□□□ -1.12
TRAF3-207ENST00000559734 ZNF221Q9UK13 617 aa8.04□□□□□ -1.12
TRAF3-207ENST00000559734 TP53TG1Q9Y2A0 90 aa8.04□□□□□ -1.12
TRAF3-207ENST00000559734 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.03□□□□□ -1.12
TRAF3-207ENST00000559734 ZNF320A2RRD8 509 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 FAM223BA6NKX1 122 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 M0R1X1 148 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 XRCC3O43542 346 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 OR2C1O95371 312 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 IGLV2-23P01705 113 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 CDK1P06493 297 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 MED14OSP0DP75 135 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 CBLN1P23435 193 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 MAPK3P27361 379 aaPredicted RBP8.03□□□□□ -1.12
TRAF3-207ENST00000559734 CEACAM6P40199 344 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 TNXAQ16473 311 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 ANKRD55Q3KP44 614 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 Q6ZWC4 215 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 C6orf201Q7Z4U5 140 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 FAM223AQ8IWN6 122 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 SVOPQ8N4V2 548 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 EDARADDQ8WWZ3 215 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 ACOT12Q8WYK0 555 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 FAAP24Q9BTP7 215 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 MND1Q9BWT6 205 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 UBQLN2Q9UHD9 624 aa8.03□□□□□ -1.12
TRAF3-207ENST00000559734 A6NJY4 79 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 PTGES3LE9PB15 166 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 SHOXO15266 292 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 GGCTO75223 188 aaKnown RBP8.02□□□□□ -1.13
TRAF3-207ENST00000559734 OR2J3O76001 311 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 IGHV3-23P01764 117 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 RPL35AP18077 110 aaKnown RBP8.02□□□□□ -1.13
TRAF3-207ENST00000559734 ZBTB25P24278 435 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 NANOS2P60321 138 aaKnown RBP8.02□□□□□ -1.13
TRAF3-207ENST00000559734 ZNF45Q02386 682 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 INSL4Q14641 139 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 ACSM3Q53FZ2 586 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 BTNL8Q6UX41 500 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 OR1L6Q8NGR2 347 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 NRG4Q8WWG1 115 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 UQCC2Q9BRT2 126 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 AGMATQ9BSE5 352 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 MLXQ9UH92 298 aa8.02□□□□□ -1.13
TRAF3-207ENST00000559734 LSM2Q9Y333 95 aaKnown RBP8.02□□□□□ -1.13
TRAF3-207ENST00000559734 ITGB1BP1O14713 200 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 PROP1O75360 226 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 IFNA4P05014 189 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 CRYGBP07316 175 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 CTRB1P17538 263 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 ATF4P18848 351 aaPredicted RBP8.01□□□□□ -1.13
TRAF3-207ENST00000559734 AQP4P55087 323 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 HLA-DRB3P79483 266 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 CBX3Q13185 183 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 IRF3Q14653 427 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 RBMS2Q15434 407 aaKnown RBP8.01□□□□□ -1.13
TRAF3-207ENST00000559734 SPHARQ15513 63 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 C15orf32Q32M92 178 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 CTRB2Q6GPI1 263 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 IDO2Q6ZQW0 420 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 LRRTM1Q86UE6 522 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 MS4A15Q8N5U1 240 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 STPG3Q8N7X2 389 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 UXS1Q8NBZ7 420 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 SRSF12Q8WXF0 261 aaKnown RBP8.01□□□□□ -1.13
TRAF3-207ENST00000559734 SCN3BQ9NY72 215 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 GHRLQ9UBU3 117 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 S4R3C0 116 aa8.01□□□□□ -1.13
TRAF3-207ENST00000559734 TMEM213A2RRL7 107 aa8□□□□□ -1.13
TRAF3-207ENST00000559734 LGALS9O00182 355 aa8□□□□□ -1.13
TRAF3-207ENST00000559734 MED22Q15528 200 aa8□□□□□ -1.13
TRAF3-207ENST00000559734 C1orf100Q5SVJ3 147 aa8□□□□□ -1.13
TRAF3-207ENST00000559734 OR10K2Q6IF99 312 aa8□□□□□ -1.13
TRAF3-207ENST00000559734 RBPMS2Q6ZRY4 209 aaKnown RBP8□□□□□ -1.13
TRAF3-207ENST00000559734 LINC00336Q6ZUF6 198 aa8□□□□□ -1.13
TRAF3-207ENST00000559734 MOB1BQ7L9L4 216 aa8□□□□□ -1.13
TRAF3-207ENST00000559734 PHYHIPQ92561 330 aa8□□□□□ -1.13
TRAF3-207ENST00000559734 RNF183Q96D59 192 aa8□□□□□ -1.13
TRAF3-207ENST00000559734 HDHD3Q9BSH5 251 aaPredicted RBP8□□□□□ -1.13
TRAF3-207ENST00000559734 RYR1P21817 5038 aa8□□□□□ -1.13
TRAF3-207ENST00000559734 SRRM4A7MD48 611 aaKnown RBP7.99□□□□□ -1.13
TRAF3-207ENST00000559734 UBE2CO00762 179 aa7.99□□□□□ -1.13
TRAF3-207ENST00000559734 ACTL6BO94805 426 aa7.99□□□□□ -1.13
TRAF3-207ENST00000559734 SCTP09683 121 aa7.99□□□□□ -1.13
TRAF3-207ENST00000559734 UBBP0CG47 229 aa7.99□□□□□ -1.13
TRAF3-207ENST00000559734 CD37P11049 281 aa7.99□□□□□ -1.13
TRAF3-207ENST00000559734 FCGR2BP31994 310 aaPredicted RBP7.99□□□□□ -1.13
TRAF3-207ENST00000559734 ARL3P36405 182 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms