RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 PPIAL4GP0DN37 164 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 NQO2P16083 231 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 CAV2P51636 162 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 NHLH2Q02577 135 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 TLE4Q04727 773 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 TNFRSF9Q07011 255 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 UBAC2Q8NBM4 344 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 PCNPQ8WW12 178 aaKnown RBP10.37□□□□□ -0.75
USP3-213ENST00000559711 SMIM8Q96KF7 97 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 ZNRD1Q9P1U0 126 aa10.37□□□□□ -0.75
USP3-213ENST00000559711 SPTAN1Q13813 2472 aaKnown RBP10.36□□□□□ -0.75
USP3-213ENST00000559711 NDUFS7O75251 213 aa10.36□□□□□ -0.75
USP3-213ENST00000559711 S100A1P23297 94 aa10.36□□□□□ -0.75
USP3-213ENST00000559711 ZNF137PP52743 207 aa10.36□□□□□ -0.75
USP3-213ENST00000559711 UBE2KP61086 200 aa10.36□□□□□ -0.75
USP3-213ENST00000559711 RPL23AP62750 156 aaKnown RBP10.36□□□□□ -0.75
USP3-213ENST00000559711 BAXQ07812 192 aa10.36□□□□□ -0.75
USP3-213ENST00000559711 FAM71F2Q6NXP2 309 aa10.36□□□□□ -0.75
USP3-213ENST00000559711 CLEC9AQ6UXN8 241 aa10.36□□□□□ -0.75
USP3-213ENST00000559711 ABHD12Q8N2K0 398 aa10.36□□□□□ -0.75
USP3-213ENST00000559711 OR9G1Q8NH87 305 aa10.36□□□□□ -0.75
USP3-213ENST00000559711 ST6GALNAC6Q969X2 333 aa10.36□□□□□ -0.75
USP3-213ENST00000559711 ARV1Q9H2C2 271 aa10.36□□□□□ -0.75
USP3-213ENST00000559711 TMEM133Q9H2Q1 129 aa10.36□□□□□ -0.75
USP3-213ENST00000559711 WFDC1Q9HC57 220 aa10.36□□□□□ -0.75
USP3-213ENST00000559711 TXNL1O43396 289 aa10.35□□□□□ -0.75
USP3-213ENST00000559711 MED6O75586 246 aa10.35□□□□□ -0.75
USP3-213ENST00000559711 GPR6P46095 362 aaPredicted RBP10.35□□□□□ -0.75
USP3-213ENST00000559711 TAGLNQ01995 201 aaKnown RBP10.35□□□□□ -0.75
USP3-213ENST00000559711 POU2AF1Q16633 256 aa10.35□□□□□ -0.75
USP3-213ENST00000559711 TNFRSF14Q92956 283 aa10.35□□□□□ -0.75
USP3-213ENST00000559711 TMEM186Q96B77 213 aa10.35□□□□□ -0.75
USP3-213ENST00000559711 SMIM3Q9BZL3 60 aa10.35□□□□□ -0.75
USP3-213ENST00000559711 MED9Q9NWA0 146 aa10.35□□□□□ -0.75
USP3-213ENST00000559711 COL12A1Q99715 3063 aa10.35□□□□□ -0.75
USP3-213ENST00000559711 MALRD1Q5VYJ5 2156 aa10.35□□□□□ -0.75
USP3-213ENST00000559711 C22orf46C9J442 243 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 CRYZL1O95825 349 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 OR9G9P0C7N8 305 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 ERVK-16P61578 105 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 FAM74A1Q5RGS3 127 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 DHRS7BQ6IAN0 325 aaPredicted RBP10.34□□□□□ -0.75
USP3-213ENST00000559711 EIF5AL1Q6IS14 154 aaKnown RBP10.34□□□□□ -0.75
USP3-213ENST00000559711 PDZD9Q8IXQ8 264 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 OR10X1Q8NGY0 326 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 RBKSQ9H477 322 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 UBR5O95071 2799 aaPredicted RBP10.34□□□□□ -0.75
USP3-213ENST00000559711 BORCS7-ASMTA0A0B4J1R7 106 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 LEUTXA8MZ59 168 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 FGF16O43320 207 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 LIPFP07098 398 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 RRASP10301 218 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 GNB2P62879 340 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 OR5AN1Q8NGI8 311 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 LRRC20Q8TCA0 184 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 TMED6Q8WW62 240 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 SSBP3Q9BWW4 388 aaPredicted RBP10.34□□□□□ -0.75
USP3-213ENST00000559711 SLC35D1Q9NTN3 355 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 PSENENQ9NZ42 101 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 CACFD1Q9UGQ2 172 aa10.34□□□□□ -0.75
USP3-213ENST00000559711 LOC105371242A0A075B767 164 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 IGHV2-26A0A0B4J1V2 119 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 hCG_1809904A0A1W2PP81 198 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 A0A1W2PPE2 198 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 A0A1W2PR64 198 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 A0A1W2PRV1 198 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 CST7O76096 145 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 HRASP01112 189 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 IGLV1-47P01700 117 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 IL6RP08887 468 aaPredicted RBP10.33□□□□□ -0.76
USP3-213ENST00000559711 FAM157CP0CG43 387 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 IAPPP10997 89 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 SULT1A1P50225 295 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 RELBQ01201 579 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 SRSF1Q07955 248 aaKnown RBP eCLIP10.33□□□□□ -0.76
USP3-213ENST00000559711 RTL8BQ17RB0 113 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 PDLIM3Q53GG5 364 aaPredicted RBP10.33□□□□□ -0.76
USP3-213ENST00000559711 SSX9Q7RTT3 188 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 VKORC1L1Q8N0U8 176 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 OR52E5Q8NH55 327 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 RHOVQ96L33 236 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 GINS3Q9BRX5 216 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 MRPL20Q9BYC9 149 aaKnown RBP10.33□□□□□ -0.76
USP3-213ENST00000559711 TMEM140Q9NV12 185 aa10.33□□□□□ -0.76
USP3-213ENST00000559711 H0YJW9 148 aa10.32□□□□□ -0.76
USP3-213ENST00000559711 DYNLT3P51808 116 aa10.32□□□□□ -0.76
USP3-213ENST00000559711 PRRX1P54821 245 aa10.32□□□□□ -0.76
USP3-213ENST00000559711 ZNF266Q14584 549 aa10.32□□□□□ -0.76
USP3-213ENST00000559711 ZNF429Q86V71 674 aa10.32□□□□□ -0.76
USP3-213ENST00000559711 STX12Q86Y82 276 aa10.32□□□□□ -0.76
USP3-213ENST00000559711 STPG2Q8N412 459 aa10.32□□□□□ -0.76
USP3-213ENST00000559711 BEND2Q8NDZ0 799 aa10.32□□□□□ -0.76
USP3-213ENST00000559711 OR5C1Q8NGR4 320 aa10.32□□□□□ -0.76
USP3-213ENST00000559711 OR13D1Q8NGV5 346 aa10.32□□□□□ -0.76
USP3-213ENST00000559711 OR4A16Q8NH70 328 aa10.32□□□□□ -0.76
USP3-213ENST00000559711 RNF141Q8WVD5 230 aa10.32□□□□□ -0.76
USP3-213ENST00000559711 CXorf58Q96LI9 332 aa10.32□□□□□ -0.76
USP3-213ENST00000559711 CIB3Q96Q77 187 aaPredicted RBP10.32□□□□□ -0.76
USP3-213ENST00000559711 NABP2Q9BQ15 211 aa10.32□□□□□ -0.76
USP3-213ENST00000559711 AIFM2Q9BRQ8 373 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms