RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 PROP1O75360 226 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 GYPAP02724 150 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 ZNF134P52741 427 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 SPCS3P61009 180 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 MEF2CQ06413 473 aaPredicted RBP9.33□□□□□ -0.92
CLPX-204ENST00000559152 RHEBQ15382 184 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 KHDC3LQ587J8 217 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 ZNF506Q5JVG8 444 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 FAM201AQ5SY85 155 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 PRAMEF5Q5TYX0 476 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 FAM122CQ6P4D5 195 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 CBLN2Q8IUK8 224 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 DEFB108BQ8NET1 73 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 CCL13Q99616 98 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 SOX15O60248 233 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 ZG16O60844 167 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 IFNA17P01571 189 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 CCL20P78556 96 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 CCL8P80075 99 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 FLI1Q01543 452 aaPredicted RBP9.33□□□□□ -0.92
CLPX-204ENST00000559152 TLE1Q04724 770 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 PDLIM3Q53GG5 364 aaPredicted RBP9.33□□□□□ -0.92
CLPX-204ENST00000559152 RSG1Q9BU20 258 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 GAL3ST2Q9H3Q3 398 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 TUBA4BQ9H853 241 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 SAP30LQ9HAJ7 183 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 RPRMQ9NS64 109 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 SVILO95425 2214 aa9.33□□□□□ -0.92
CLPX-204ENST00000559152 CHD3Q12873 2000 aaKnown RBP9.33□□□□□ -0.92
CLPX-204ENST00000559152 UBE2L5PA0A1B0GUS4 154 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 M0R036 132 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 NFYBP25208 207 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 VWC2Q2TAL6 325 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 RPL39P5Q59GN2 51 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 CT45A1Q5HYN5 189 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 ZNF429Q86V71 674 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 C15orf54Q8N8G6 183 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 OR10G4Q8NGN3 311 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 CLDND2Q8NHS1 167 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 CT45A3Q8NHU0 189 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 DDB2Q92466 427 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 RARRES2Q99969 163 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 MS4A5Q9H3V2 200 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 RPS10P5Q9NQ39 176 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 LINC00312Q9Y6C7 94 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 KIAA2026Q5HYC2 2103 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 PMS2P5A8MQ11 134 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 C17orf112F2Z3M2 114 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 TMPRSS2O15393 492 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 IFNA1P01562 189 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 SELLP14151 372 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 MRPS11P82912 194 aaKnown RBP9.32□□□□□ -0.92
CLPX-204ENST00000559152 PMS2P11Q13670 270 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 HFEQ30201 348 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 ZNF709Q8N972 641 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 PLPPR2Q96GM1 343 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 ZNF251Q9BRH9 671 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 AIFM2Q9BRQ8 373 aa9.32□□□□□ -0.92
CLPX-204ENST00000559152 QTRT1Q9BXR0 403 aaKnown RBP9.32□□□□□ -0.92
CLPX-204ENST00000559152 PPIAL4EA0A075B759 164 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 C7orf77A4D0Y5 90 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 PPIAL4DF5H284 164 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 FAM87AP0C7U9 286 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 PPIAL4FP0DN26 164 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 OR13C7P0DN81 318 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 PLA2G5P39877 138 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 HAGHQ16775 308 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 AWAT1Q58HT5 328 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 ZNF787Q6DD87 383 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 FAM216BQ8N7L0 139 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 ZNF439Q8NDP4 499 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 ZDHHC16Q969W1 377 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 RAB39BQ96DA2 213 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 WFIKKN1Q96NZ8 548 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 GGACTQ9BVM4 153 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 SLC25A10Q9UBX3 287 aaPredicted RBP9.31□□□□□ -0.92
CLPX-204ENST00000559152 MLXQ9UH92 298 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 PPIAL4AQ9Y536 164 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 SAA2-SAA4A0A096LPE2 208 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 HRASP01112 189 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 SRP19P09132 144 aaKnown RBP9.31□□□□□ -0.92
CLPX-204ENST00000559152 OR9G9P0C7N8 305 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 SAA2P0DJI9 122 aaPredicted RBP9.31□□□□□ -0.92
CLPX-204ENST00000559152 DAOP14920 347 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 NDUFB7P17568 137 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 TAGLN2P37802 199 aaKnown RBP9.31□□□□□ -0.92
CLPX-204ENST00000559152 LINC00205P59089 165 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 ICAM4Q14773 271 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 PRR30Q53SZ7 412 aaPredicted RBP9.31□□□□□ -0.92
CLPX-204ENST00000559152 NCMAPQ5T1S8 102 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 ADAM5Q6NVV9 412 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 LYG1Q8N1E2 194 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 TMEM140Q9NV12 185 aa9.31□□□□□ -0.92
CLPX-204ENST00000559152 CISD1Q9NZ45 108 aaKnown RBP9.31□□□□□ -0.92
CLPX-204ENST00000559152 RPUSD1Q9UJJ7 312 aaKnown RBP9.31□□□□□ -0.92
CLPX-204ENST00000559152 PRR14LQ5THK1 2151 aa9.3□□□□□ -0.92
CLPX-204ENST00000559152 TRGV8A0A0C4DH27 118 aa9.3□□□□□ -0.92
CLPX-204ENST00000559152 LOC102723971A0A1B0GUV8 181 aa9.3□□□□□ -0.92
CLPX-204ENST00000559152 TMEM178BH3BS89 294 aa9.3□□□□□ -0.92
CLPX-204ENST00000559152 SLC31A2O15432 143 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms