RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 KCNIP1Q9NZI2 227 aa13.04□□□□□ -0.32
CDC42BPB-204ENST00000559043 KAAG1Q9UBP8 84 aa13.04□□□□□ -0.32
CDC42BPB-204ENST00000559043 TEX15Q9BXT5 2789 aa13.04□□□□□ -0.32
CDC42BPB-204ENST00000559043 ZNF585BQ52M93 769 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 DRAM1Q8N682 238 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 HSD17B11Q8NBQ5 300 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 ZNF665Q9H7R5 613 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 PATZ1Q9HBE1 687 aaKnown RBP13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 CELSR1Q9NYQ6 3014 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 ZANQ9Y493 2812 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 DOCK11Q5JSL3 2073 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 C12orf77C9JDV5 145 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 TRIM77I1YAP6 450 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 K7N7A8 449 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 NDUFA2O43678 99 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 ATF4P18848 351 aaPredicted RBP13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 SNCAP37840 140 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 OR3A1P47881 315 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 MIDNQ504T8 468 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 MAPK1IP1LQ8NDC0 245 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 UBALD1Q8TB05 177 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 GALMQ96C23 342 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 COQ2Q96H96 371 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 SCRT1Q9BWW7 348 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 C19orf12Q9NSK7 152 aa13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 RBM7Q9Y580 266 aaKnown RBP13.03□□□□□ -0.32
CDC42BPB-204ENST00000559043 C9JQL5 133 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 RNF223E7ERA6 249 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 WRBO00258 174 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 DVL1O14640 695 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 AGPAT2O15120 278 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 SNAPINO95295 136 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 TSPAN15O95858 294 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 IGHV2-5P01817 119 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 SFTA3P0C7M3 94 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 CAMLGP49069 296 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 PAX5Q02548 391 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 CLINT1Q14677 625 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 Q6ZRM9 215 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 ZNF561Q8N587 486 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 ZBTB34Q8NCN2 500 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 OR5C1Q8NGR4 320 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 KCNS2Q9ULS6 477 aa13.02□□□□□ -0.32
CDC42BPB-204ENST00000559043 ABCA2Q9BZC7 2435 aa13.02□□□□□ -0.33
CDC42BPB-204ENST00000559043 YLPM1P49750 1951 aaKnown RBP13.02□□□□□ -0.33
CDC42BPB-204ENST00000559043 IGKV1-5P01602 117 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 EPHA1P21709 976 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 OMGP23515 440 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 FHITP49789 147 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 DYNLT3P51808 116 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 AESQ08117 197 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 KIAA2026Q5HYC2 2103 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 CIARTQ8N365 385 aaPredicted RBP13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 ZNF645Q8N7E2 425 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 OR1L1Q8NH94 360 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 SNX22Q96L94 193 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 RAB40CQ96S21 281 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 MIOXQ9UGB7 285 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 MEX3AA1L020 520 aaKnown RBP13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 RNF212BA8MTL3 300 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 ZFP36P26651 326 aaKnown RBP13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 ATP6V0CP27449 155 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 ZNF616Q08AN1 781 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 EIF4EBP1Q13541 118 aaPredicted RBP13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 MSMO1Q15800 293 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 TPRX1Q8N7U7 411 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 CLRN3Q8NCR9 226 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 WSB1Q9Y6I7 421 aa13.01□□□□□ -0.33
CDC42BPB-204ENST00000559043 UMAD1C9J7I0 102 aa13□□□□□ -0.33
CDC42BPB-204ENST00000559043 TXNL1O43396 289 aa13□□□□□ -0.33
CDC42BPB-204ENST00000559043 CST7O76096 145 aa13□□□□□ -0.33
CDC42BPB-204ENST00000559043 NXPH3O95157 252 aa13□□□□□ -0.33
CDC42BPB-204ENST00000559043 HBZP02008 142 aa13□□□□□ -0.33
CDC42BPB-204ENST00000559043 PRH1P02810 166 aa13□□□□□ -0.33
CDC42BPB-204ENST00000559043 H2AFB1P0C5Y9 115 aa13□□□□□ -0.33
CDC42BPB-204ENST00000559043 SLC25A16P16260 332 aa13□□□□□ -0.33
CDC42BPB-204ENST00000559043 DHRS7BQ6IAN0 325 aaPredicted RBP13□□□□□ -0.33
CDC42BPB-204ENST00000559043 TMEM182Q6ZP80 229 aaPredicted RBP13□□□□□ -0.33
CDC42BPB-204ENST00000559043 NEIL1Q96FI4 390 aaPredicted RBP13□□□□□ -0.33
CDC42BPB-204ENST00000559043 CACNG5Q9UF02 275 aa13□□□□□ -0.33
CDC42BPB-204ENST00000559043 CR1P17927 2039 aa13□□□□□ -0.33
CDC42BPB-204ENST00000559043 USF1P22415 310 aaPredicted RBP13□□□□□ -0.33
CDC42BPB-204ENST00000559043 RPL23AP62750 156 aaKnown RBP13□□□□□ -0.33
CDC42BPB-204ENST00000559043 IZUMO4Q1ZYL8 232 aa13□□□□□ -0.33
CDC42BPB-204ENST00000559043 WDR25Q64LD2 544 aaPredicted RBP13□□□□□ -0.33
CDC42BPB-204ENST00000559043 RNASE11Q8TAA1 199 aaKnown RBP13□□□□□ -0.33
CDC42BPB-204ENST00000559043 DCTN5Q9BTE1 182 aa13□□□□□ -0.33
CDC42BPB-204ENST00000559043 SLC25A10Q9UBX3 287 aaPredicted RBP13□□□□□ -0.33
CDC42BPB-204ENST00000559043 NKX6-3A6NJ46 265 aa12.99□□□□□ -0.33
CDC42BPB-204ENST00000559043 NDUFB3O43676 98 aa12.99□□□□□ -0.33
CDC42BPB-204ENST00000559043 GLIPR1P48060 266 aa12.99□□□□□ -0.33
CDC42BPB-204ENST00000559043 NPBWR1P48145 328 aa12.99□□□□□ -0.33
CDC42BPB-204ENST00000559043 KRBOX4Q5JUW0 171 aa12.99□□□□□ -0.33
CDC42BPB-204ENST00000559043 OR52L2PQ8NGH6 319 aa12.99□□□□□ -0.33
CDC42BPB-204ENST00000559043 OR2G3Q8NGZ4 309 aa12.99□□□□□ -0.33
CDC42BPB-204ENST00000559043 GNPNAT1Q96EK6 184 aaPredicted RBP12.99□□□□□ -0.33
CDC42BPB-204ENST00000559043 ATP5SQ99766 215 aa12.99□□□□□ -0.33
CDC42BPB-204ENST00000559043 SYNGR2O43760 224 aa12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 ZNF16P17020 682 aaPredicted RBP12.98□□□□□ -0.33
CDC42BPB-204ENST00000559043 NDUFB7P17568 137 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms