RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 HIST2H3AQ71DI3 136 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 ZNF567Q8N184 647 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 UBL4BQ8N7F7 174 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 GPR32P1Q8NGA4 272 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 ASB17Q8WXJ9 295 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 ANKRD36BP1Q96IX9 119 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 TMEM109Q9BVC6 243 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 GNB1LQ9BYB4 327 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 AICDAQ9GZX7 198 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 OR51I2Q9H344 312 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 TUBA4BQ9H853 241 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 EMC3Q9P0I2 261 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 HEY1Q9Y5J3 304 aa1.09□□□□□ -2.23
VPS13C-207ENST00000558919 PCYT1BQ9Y5K3 369 aaPredicted RBP1.09□□□□□ -2.23
VPS13C-207ENST00000558919 PRRC2BQ5JSZ5 2229 aaKnown RBP1.09□□□□□ -2.24
VPS13C-207ENST00000558919 ADAMTSL1Q8N6G6 1762 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 CRB1P82279 1406 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 GBF1Q92538 1859 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 ADAMTS7Q9UKP4 1686 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 TGIF2-C20orf24A0A0A6YYL0 155 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 A0A1W2PQL4 384 aaPredicted RBP1.08□□□□□ -2.24
VPS13C-207ENST00000558919 EVPLLA8MZ36 301 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 M0R381 172 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 GSTZ1O43708 216 aaPredicted RBP1.08□□□□□ -2.24
VPS13C-207ENST00000558919 MT-CO2P00403 227 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 IGLV3-27P01718 113 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 REG1AP05451 166 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 CRYGDP07320 174 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 ATP6V0CP27449 155 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 OR10J1P30954 320 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 OPRM1P35372 400 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 REG1BP48304 166 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 SULT1A1P50225 295 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 CDK9P50750 372 aaKnown RBP1.08□□□□□ -2.24
VPS13C-207ENST00000558919 CTBP2P56545 445 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 BTN3A2P78410 334 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 MRPS25P82663 173 aaKnown RBP1.08□□□□□ -2.24
VPS13C-207ENST00000558919 REEP5Q00765 189 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 AESQ08117 197 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 OR2F1Q13607 317 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 HTR4Q13639 388 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 SPA17Q15506 151 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 HIST3H3Q16695 136 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 LRRC75BQ2VPJ9 315 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 AKIRIN2Q53H80 203 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 SYPL2Q5VXT5 272 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 CCDC121Q6ZUS5 278 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 ZNF767PQ75MW2 155 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 BAP18Q8IXM2 172 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 OR1M1Q8NGA1 313 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 OR51D1Q8NGF3 324 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 OR4K13Q8NH42 304 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 MS4A6EQ96DS6 147 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 IMP4Q96G21 291 aaKnown RBP1.08□□□□□ -2.24
VPS13C-207ENST00000558919 DIRAS2Q96HU8 199 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 OR52B2Q96RD2 323 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 TBX5Q99593 518 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 UPK3BQ9BT76 320 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 CCDC94Q9BW85 323 aaPredicted RBP1.08□□□□□ -2.24
VPS13C-207ENST00000558919 OR51I1Q9H343 314 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 SMDT1Q9H4I9 107 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 FAM96AQ9H5X1 160 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 XPNPEP1Q9NQW7 623 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 SLC2A9Q9NRM0 540 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 PSORS1C2Q9UIG4 136 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 SLC22A13Q9Y226 551 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 MRPS16Q9Y3D3 137 aaKnown RBP1.08□□□□□ -2.24
VPS13C-207ENST00000558919 CHD5Q8TDI0 1954 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 PTPRJQ12913 1337 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 DSCAMO60469 2012 aa1.08□□□□□ -2.24
VPS13C-207ENST00000558919 NYNRINQ9P2P1 1898 aaKnown RBP1.07□□□□□ -2.24
VPS13C-207ENST00000558919 A0A1B0GV50 99 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 ODF3BA8MYP8 253 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 DISC1C4P0D8 188 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 TRAPPC3O43617 180 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 S1PR2O95136 353 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 KRT75O95678 551 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 TCRBP04435 133 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 HLA-DQB2P05538 268 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 CD7P09564 240 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 BLVRBP30043 206 aaPredicted RBP1.07□□□□□ -2.24
VPS13C-207ENST00000558919 HOXA6P31267 233 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 LPAR6P43657 344 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 MARCKSL1P49006 195 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 IDH3GP51553 393 aaPredicted RBP1.07□□□□□ -2.24
VPS13C-207ENST00000558919 LINC00313P59037 77 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 TAS2R45P59539 299 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 SPCS3P61009 180 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 RAB5BP61020 215 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 FGF12P61328 243 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 ZNF117Q03924 483 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 EMX1Q04741 257 aaPredicted RBP1.07□□□□□ -2.24
VPS13C-207ENST00000558919 PRDX4Q13162 271 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 MRPL51Q4U2R6 128 aaKnown RBP1.07□□□□□ -2.24
VPS13C-207ENST00000558919 TMEM31Q5JXX7 168 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 C1orf194Q5T5A4 169 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 SFXN4Q6P4A7 337 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 SBSNQ6UWP8 590 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 ZNF550Q7Z398 422 aa1.07□□□□□ -2.24
VPS13C-207ENST00000558919 LRRC34Q8IZ02 419 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms