RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 WNT2P09544 360 aa8.79□□□□□ -1
CUX1-217ENST00000558836 HTD2P86397 168 aa8.79□□□□□ -1
CUX1-217ENST00000558836 SLC38A11Q08AI6 406 aa8.79□□□□□ -1
CUX1-217ENST00000558836 C17orf58Q2M2W7 97 aa8.79□□□□□ -1
CUX1-217ENST00000558836 DHRS7BQ6IAN0 325 aaPredicted RBP8.79□□□□□ -1
CUX1-217ENST00000558836 CFAP161Q6P656 301 aa8.79□□□□□ -1
CUX1-217ENST00000558836 Q8TCH9 128 aa8.79□□□□□ -1
CUX1-217ENST00000558836 SLC35B3Q9H1N7 401 aa8.79□□□□□ -1
CUX1-217ENST00000558836 HSPB7Q9UBY9 170 aa8.79□□□□□ -1
CUX1-217ENST00000558836 MED13LQ71F56 2210 aa8.79□□□□□ -1
CUX1-217ENST00000558836 ZFP92A6NM28 416 aa8.79□□□□□ -1
CUX1-217ENST00000558836 P0C879 139 aa8.79□□□□□ -1
CUX1-217ENST00000558836 ADIPOQQ15848 244 aa8.79□□□□□ -1
CUX1-217ENST00000558836 MRGPRGQ86SM5 289 aa8.79□□□□□ -1
CUX1-217ENST00000558836 PPP1R35Q8TAP8 253 aa8.79□□□□□ -1
CUX1-217ENST00000558836 DTD1Q8TEA8 209 aa8.79□□□□□ -1
CUX1-217ENST00000558836 R3HDM4Q96D70 268 aa8.79□□□□□ -1
CUX1-217ENST00000558836 PBDC1Q9BVG4 233 aa8.79□□□□□ -1
CUX1-217ENST00000558836 GNG13Q9P2W3 67 aa8.79□□□□□ -1
CUX1-217ENST00000558836 MAP1AP78559 2803 aaPredicted RBP8.78□□□□□ -1
CUX1-217ENST00000558836 C7orf77A4D0Y5 90 aa8.78□□□□□ -1
CUX1-217ENST00000558836 IFNA17P01571 189 aa8.78□□□□□ -1
CUX1-217ENST00000558836 ARG1P05089 322 aa8.78□□□□□ -1
CUX1-217ENST00000558836 NDUFB7P17568 137 aa8.78□□□□□ -1
CUX1-217ENST00000558836 CFHR2P36980 270 aa8.78□□□□□ -1
CUX1-217ENST00000558836 HBG1P69891 147 aa8.78□□□□□ -1
CUX1-217ENST00000558836 HBG2P69892 147 aa8.78□□□□□ -1
CUX1-217ENST00000558836 MSMO1Q15800 293 aa8.78□□□□□ -1
CUX1-217ENST00000558836 ZNF726P1Q15940 193 aa8.78□□□□□ -1
CUX1-217ENST00000558836 HFEQ30201 348 aa8.78□□□□□ -1
CUX1-217ENST00000558836 CT45A1Q5HYN5 189 aa8.78□□□□□ -1
CUX1-217ENST00000558836 CT45A3Q8NHU0 189 aa8.78□□□□□ -1
CUX1-217ENST00000558836 C2CD4CQ8TF44 421 aa8.78□□□□□ -1
CUX1-217ENST00000558836 CCL17Q92583 94 aa8.78□□□□□ -1
CUX1-217ENST00000558836 C14orf79Q96F83 325 aa8.78□□□□□ -1
CUX1-217ENST00000558836 WFIKKN1Q96NZ8 548 aa8.78□□□□□ -1
CUX1-217ENST00000558836 IFI27L2Q9H2X8 130 aa8.78□□□□□ -1
CUX1-217ENST00000558836 IL19Q9UHD0 177 aa8.78□□□□□ -1
CUX1-217ENST00000558836 KPTNQ9Y664 436 aa8.78□□□□□ -1
CUX1-217ENST00000558836 H7C2Y5 167 aa8.78□□□□□ -1
CUX1-217ENST00000558836 NDUFA2O43678 99 aa8.78□□□□□ -1
CUX1-217ENST00000558836 TMEM95Q3KNT9 176 aa8.78□□□□□ -1
CUX1-217ENST00000558836 LYG1Q8N1E2 194 aa8.78□□□□□ -1
CUX1-217ENST00000558836 EDARADDQ8WWZ3 215 aa8.78□□□□□ -1
CUX1-217ENST00000558836 GAFA1Q96PS6 74 aa8.78□□□□□ -1
CUX1-217ENST00000558836 HSD17B10Q99714 261 aaKnown RBP8.78□□□□□ -1
CUX1-217ENST00000558836 ZNF665Q9H7R5 613 aa8.78□□□□□ -1
CUX1-217ENST00000558836 PLXNB1O43157 2135 aa8.78□□□□□ -1
CUX1-217ENST00000558836 TANC2Q9HCD6 1990 aa8.78□□□□□ -1
CUX1-217ENST00000558836 K7ENP7 123 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 AKR1D1P51857 326 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 RPS23P62266 143 aaKnown RBP8.77□□□□□ -1.01
CUX1-217ENST00000558836 SOHLH1Q5JUK2 328 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 TMEM14EPQ6UXP3 125 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 ZNF66Q6ZN08 573 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 TCF23Q7RTU1 214 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 CYB561D1Q8N8Q1 229 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 TOLLIPQ9H0E2 274 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 TRGV8A0A0C4DH27 118 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 IGKV1D-33P01593 117 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 IGKV1-33P01594 117 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 CRYBA1P05813 215 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 MYOD1P15172 320 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 RAB2AP61019 212 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 TLE4Q04727 773 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 TFF3Q07654 80 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 LRRC75BQ2VPJ9 315 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 STUMQ69YW2 141 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 COMMD1Q8N668 190 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 WDR61Q9GZS3 305 aaKnown RBP8.77□□□□□ -1.01
CUX1-217ENST00000558836 SAV1Q9H4B6 383 aaPredicted RBP8.77□□□□□ -1.01
CUX1-217ENST00000558836 COA4Q9NYJ1 87 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 MLXQ9UH92 298 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 JPT1Q9UK76 154 aa8.77□□□□□ -1.01
CUX1-217ENST00000558836 SAA2-SAA4A0A096LPE2 208 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 PIGBOS1A0A0B4J2F0 54 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 A0A1W2PPE2 198 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 YPEL1O60688 119 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 OPN1MWP04001 364 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 SAA2P0DJI9 122 aaPredicted RBP8.76□□□□□ -1.01
CUX1-217ENST00000558836 OPN1MW2P0DN77 364 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 OPN1MW3P0DN78 364 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 IRF2P14316 349 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 TNFSF4P23510 183 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 PTAFRP25105 342 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 GATA4P43694 442 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 FAM209BQ5JX69 171 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 PRAMEF5Q5TYX0 476 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 TAF15Q92804 592 aaKnown RBP eCLIP8.76□□□□□ -1.01
CUX1-217ENST00000558836 YPEL2Q96QA6 119 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 OR6C3Q9NZP0 311 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 HRNRQ86YZ3 2850 aaPredicted RBP8.76□□□□□ -1.01
CUX1-217ENST00000558836 TRGV10A0A0A0MS01 117 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 KBTBD11-OT1A0A1B0GTJ5 212 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 COL8A2P25067 703 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 ICAM4Q14773 271 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 ZNF561Q8N587 486 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 RCC1LQ96I51 464 aaKnown RBP8.76□□□□□ -1.01
CUX1-217ENST00000558836 S1PR3Q99500 378 aa8.76□□□□□ -1.01
CUX1-217ENST00000558836 TMPRSS5Q9H3S3 457 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms