RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 DERL1Q9BUN8 251 aa13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 PEF1Q9UBV8 284 aaKnown RBP13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 IL19Q9UHD0 177 aa13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 LRRC30A6NM36 301 aa13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 C10orf142B7Z368 130 aa13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 F2Z2F3 143 aa13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 M0R1X1 148 aa13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 CEACAM3P40198 252 aa13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 MRPL54Q6P161 138 aaKnown RBP13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 C12orf76Q8N812 135 aaPredicted RBP13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 OR52L2PQ8NGH6 319 aa13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 OR4S2Q8NH73 311 aa13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 ZNF596Q8TC21 504 aa13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 EAF1Q96JC9 268 aaPredicted RBP13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 SGCZQ96LD1 299 aa13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 CLEC7AQ9BXN2 247 aa13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 KCNIP1Q9NZI2 227 aa13.63□□□□□ -0.23
HMBOX1-212ENST00000558662 C2orf16Q68DN1 1984 aa13.62□□□□□ -0.23
HMBOX1-212ENST00000558662 IGHV5-51A0A0C4DH38 117 aa13.62□□□□□ -0.23
HMBOX1-212ENST00000558662 C9orf172C9J069 976 aa13.62□□□□□ -0.23
HMBOX1-212ENST00000558662 TRAPPC2LH3BP13 241 aa13.62□□□□□ -0.23
HMBOX1-212ENST00000558662 DNPH1O43598 174 aa13.62□□□□□ -0.23
HMBOX1-212ENST00000558662 UBE2G1P62253 170 aa13.62□□□□□ -0.23
HMBOX1-212ENST00000558662 TFF3Q07654 80 aa13.62□□□□□ -0.23
HMBOX1-212ENST00000558662 RAB30Q15771 203 aa13.62□□□□□ -0.23
HMBOX1-212ENST00000558662 ZNF718Q3SXZ3 478 aa13.62□□□□□ -0.23
HMBOX1-212ENST00000558662 FADS6Q8N9I5 356 aa13.62□□□□□ -0.23
HMBOX1-212ENST00000558662 ST6GALNAC3Q8NDV1 305 aa13.62□□□□□ -0.23
HMBOX1-212ENST00000558662 SF3B5Q9BWJ5 86 aaKnown RBP13.62□□□□□ -0.23
HMBOX1-212ENST00000558662 PRDM14Q9GZV8 571 aa13.62□□□□□ -0.23
HMBOX1-212ENST00000558662 GAGE12BA1L429 117 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 C2orf72A6NCS6 295 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 RAB29O14966 203 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 WISP2O76076 250 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 PSG1P11464 419 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 BCL3P20749 454 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 PTGDSP41222 190 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 IZUMO4Q1ZYL8 232 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 SMIM21Q3B7S5 101 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 PHYHD1Q5SRE7 291 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 FAM69BQ5VUD6 431 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 SFTPA2Q8IWL1 248 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 SLC22A18ASQ8N1D0 253 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 OR1K1Q8NGR3 316 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 OR1L1Q8NH94 360 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 CPT1CQ8TCG5 803 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 PMCHL2Q9BQD1 86 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 WNT10AQ9GZT5 417 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 METTL7AQ9H8H3 244 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 CEP350Q5VT06 3117 aa13.61□□□□□ -0.23
HMBOX1-212ENST00000558662 A0A1B0GX78 115 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 SCO2A0A1W2PP80 73 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 B4DGG1 531 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 SHISA8B8ZZ34 492 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 ISLRO14498 428 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 CRXO43186 299 aaPredicted RBP13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 IGLV2-14P01704 120 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 CCR5P51681 352 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 PDCD1Q15116 288 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 RNFT1Q5M7Z0 435 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 ZDHHC23Q8IYP9 409 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 C7orf61Q8IZ16 206 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 NFAM1Q8NET5 270 aaPredicted RBP13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 ZNF430Q9H8G1 570 aaPredicted RBP13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 TNRC6BQ9UPQ9 1833 aaKnown RBP13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 FAM181BA6NEQ2 426 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 K7EN84 100 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 BMPR1BO00238 502 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 APCSP02743 223 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 CELA2BP08218 269 aaPredicted RBP13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 IGLL1P15814 213 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 SRIP30626 198 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 BVES-AS1Q5T3Y7 98 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 GTF2H5Q6ZYL4 71 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 OR8I2Q8N0Y5 310 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 Q8N7P7 452 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 SAP30LQ9HAJ7 183 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 MTCH1Q9NZJ7 389 aa13.6□□□□□ -0.23
HMBOX1-212ENST00000558662 G3V3Y1 287 aa13.59□□□□□ -0.23
HMBOX1-212ENST00000558662 EGR1P18146 543 aa13.59□□□□□ -0.23
HMBOX1-212ENST00000558662 COL9A1P20849 921 aa13.59□□□□□ -0.23
HMBOX1-212ENST00000558662 RPL31P62899 125 aaKnown RBP13.59□□□□□ -0.23
HMBOX1-212ENST00000558662 TLE1Q04724 770 aa13.59□□□□□ -0.23
HMBOX1-212ENST00000558662 PSG7Q13046 419 aa13.59□□□□□ -0.23
HMBOX1-212ENST00000558662 CATR1Q13166 79 aa13.59□□□□□ -0.23
HMBOX1-212ENST00000558662 SLC25A40Q8TBP6 338 aa13.59□□□□□ -0.23
HMBOX1-212ENST00000558662 RCHY1Q96PM5 261 aa13.59□□□□□ -0.23
HMBOX1-212ENST00000558662 C1QTNF5Q9BXJ0 243 aa13.59□□□□□ -0.23
HMBOX1-212ENST00000558662 COMMD5Q9GZQ3 224 aa13.59□□□□□ -0.23
HMBOX1-212ENST00000558662 MS4A6AQ9H2W1 248 aa13.59□□□□□ -0.23
HMBOX1-212ENST00000558662 TMEM38BQ9NVV0 291 aa13.59□□□□□ -0.23
HMBOX1-212ENST00000558662 SMIM27A0A1W2PRY6 76 aa13.58□□□□□ -0.23
HMBOX1-212ENST00000558662 PGPEP1LA6NFU8 196 aa13.58□□□□□ -0.23
HMBOX1-212ENST00000558662 SLC17A3O00476 420 aa13.58□□□□□ -0.23
HMBOX1-212ENST00000558662 HSBP1O75506 76 aa13.58□□□□□ -0.23
HMBOX1-212ENST00000558662 ARL14EPLP0DKL9 152 aa13.58□□□□□ -0.23
HMBOX1-212ENST00000558662 HOXC12P31275 282 aa13.58□□□□□ -0.23
HMBOX1-212ENST00000558662 TMPRSS3P57727 454 aa13.58□□□□□ -0.23
HMBOX1-212ENST00000558662 PAX2Q02962 417 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms