RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 DDB2Q92466 427 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 TSNAXQ99598 290 aaKnown RBP10.04□□□□□ -0.8
TPM1-209ENST00000558072 TMUB1Q9BVT8 246 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 BEX2Q9BXY8 128 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 MRPL20Q9BYC9 149 aaKnown RBP10.04□□□□□ -0.8
TPM1-209ENST00000558072 BEX1Q9HBH7 125 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 RAB18Q9NP72 206 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 YAE1D1Q9NRH1 226 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 PITPNC1Q9UKF7 332 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 ALG5Q9Y673 324 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 ABCA1O95477 2261 aa10.04□□□□□ -0.8
TPM1-209ENST00000558072 A0A0A6YYJ9 748 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 BTBD17A6NE02 478 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 VGLL3A8MV65 326 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 H0YJW9 148 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 PROP1O75360 226 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 LY6G6DO95868 133 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 NQO2P16083 231 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 VDAC1P21796 283 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 SUPT4H1P63272 117 aaKnown RBP10.03□□□□□ -0.8
TPM1-209ENST00000558072 CYCSP99999 105 aaKnown RBP10.03□□□□□ -0.8
TPM1-209ENST00000558072 HABP2Q14520 560 aaPredicted RBP10.03□□□□□ -0.8
TPM1-209ENST00000558072 SLC9A3R2Q15599 337 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 C1orf229Q6ZS94 237 aaPredicted RBP10.03□□□□□ -0.8
TPM1-209ENST00000558072 ZNF383Q8NA42 475 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 OR2T10Q8NGZ9 312 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 RNASE11Q8TAA1 199 aaKnown RBP10.03□□□□□ -0.8
TPM1-209ENST00000558072 TP53RKQ96S44 253 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 ZFP57Q9NU63 452 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 C1RLQ9NZP8 487 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 ZNRD1Q9P1U0 126 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 HILPDAQ9Y5L2 63 aa10.03□□□□□ -0.8
TPM1-209ENST00000558072 SOX21Q9Y651 276 aaPredicted RBP10.03□□□□□ -0.8
TPM1-209ENST00000558072 FLNAP21333 2647 aaKnown RBP10.02□□□□□ -0.81
TPM1-209ENST00000558072 A0A1W2PPI3 338 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 FAM90A9PA6NNJ1 464 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 LINC00473A8K010 186 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 SHOXO15266 292 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 SPDEFO95238 335 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 MOSP00540 346 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 FSHBP01225 129 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 FGF2P09038 288 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 SLC25A6P12236 298 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 HLA-GP17693 338 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 LPAR6P43657 344 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 REG1BP48304 166 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 RPL30P62888 115 aaKnown RBP10.02□□□□□ -0.81
TPM1-209ENST00000558072 VMA21Q3ZAQ7 101 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 TMEM177Q53S58 311 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 TMEM268Q5VZI3 342 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 THOC7Q6I9Y2 204 aaKnown RBP10.02□□□□□ -0.81
TPM1-209ENST00000558072 DRAXINQ8NBI3 349 aaPredicted RBP10.02□□□□□ -0.81
TPM1-209ENST00000558072 UXS1Q8NBZ7 420 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 OR4A5Q8NH83 315 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 OR5R1Q8NH85 324 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 LSM10Q969L4 123 aaKnown RBP10.02□□□□□ -0.81
TPM1-209ENST00000558072 SEC22CQ9BRL7 303 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 CDC42EP3Q9UKI2 254 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 TEX15Q9BXT5 2789 aa10.02□□□□□ -0.81
TPM1-209ENST00000558072 TIMM23O14925 209 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 CRYZL1O95825 349 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 IGHV4-38-2P0DP08 117 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 AKR1C2P52895 323 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 RRAS2P62070 204 aaPredicted RBP10.01□□□□□ -0.81
TPM1-209ENST00000558072 RPS16P62249 146 aaKnown RBP10.01□□□□□ -0.81
TPM1-209ENST00000558072 POU2AF1Q16633 256 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 SP6Q3SY56 376 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 KLF17Q5JT82 389 aaPredicted RBP10.01□□□□□ -0.81
TPM1-209ENST00000558072 FAM120AOSQ5T036 256 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 RUSC1-AS1Q66K80 236 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 GSG1LQ6UXU4 331 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 RBMS3Q6XE24 437 aaKnown RBP10.01□□□□□ -0.81
TPM1-209ENST00000558072 H2BFWTQ7Z2G1 175 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 C16orf82Q7Z2V1 217 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 LHFPL4Q7Z7J7 247 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 PIP4P2Q8N4L2 257 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 DMBX1Q8NFW5 382 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 C5orf30Q96GV9 206 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 KIAA1456Q9P272 454 aa10.01□□□□□ -0.81
TPM1-209ENST00000558072 MAP1AP78559 2803 aaPredicted RBP10□□□□□ -0.81
TPM1-209ENST00000558072 A0A1B0GU03 582 aa10□□□□□ -0.81
TPM1-209ENST00000558072 HMX3A6NHT5 357 aa10□□□□□ -0.81
TPM1-209ENST00000558072 DBX1A6NMT0 343 aa10□□□□□ -0.81
TPM1-209ENST00000558072 M0QZK8 103 aa10□□□□□ -0.81
TPM1-209ENST00000558072 SNAPC5O75971 98 aa10□□□□□ -0.81
TPM1-209ENST00000558072 LY86O95711 162 aa10□□□□□ -0.81
TPM1-209ENST00000558072 PAX6P26367 422 aa10□□□□□ -0.81
TPM1-209ENST00000558072 EBI3Q14213 229 aa10□□□□□ -0.81
TPM1-209ENST00000558072 LRRC75BQ2VPJ9 315 aa10□□□□□ -0.81
TPM1-209ENST00000558072 ZNF585BQ52M93 769 aa10□□□□□ -0.81
TPM1-209ENST00000558072 CLEC9AQ6UXN8 241 aa10□□□□□ -0.81
TPM1-209ENST00000558072 BRD3OSQ6XYD6 125 aa10□□□□□ -0.81
TPM1-209ENST00000558072 SELENOHQ8IZQ5 122 aaKnown RBP10□□□□□ -0.81
TPM1-209ENST00000558072 ZDHHC16Q969W1 377 aa10□□□□□ -0.81
TPM1-209ENST00000558072 R3HDM4Q96D70 268 aa10□□□□□ -0.81
TPM1-209ENST00000558072 RBMXL1Q96E39 390 aaKnown RBP10□□□□□ -0.81
TPM1-209ENST00000558072 HARBI1Q96MB7 349 aa10□□□□□ -0.81
TPM1-209ENST00000558072 FKBP11Q9NYL4 201 aa10□□□□□ -0.81
TPM1-209ENST00000558072 MMP24Q9Y5R2 645 aa10□□□□□ -0.81
TPM1-209ENST00000558072 MARCH11A6NNE9 402 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 222 ms