RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 FOXE3Q13461 319 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 CXorf66Q5JRM2 361 aaPredicted RBP9.82□□□□□ -0.84
SLIRP-211ENST00000557623 ZNF66Q6ZN08 573 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 KCTD9Q7L273 389 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 SNX29P2Q8IUI4 249 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 ZBTB34Q8NCN2 500 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 OR5H2Q8NGV7 314 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 OSR1Q8TAX0 266 aaPredicted RBP9.82□□□□□ -0.84
SLIRP-211ENST00000557623 BORCS5Q969J3 196 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 HARBI1Q96MB7 349 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 PARP11Q9NR21 331 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 EHFQ9NZC4 300 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 LINC00473A8K010 186 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 ATP6V0E1O15342 81 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 RGS5O15539 181 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 PLXNB1O43157 2135 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 SLC25A17O43808 307 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 IGLV2-14P01704 120 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 IGHG4P01861 327 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 RCVRNP35243 200 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 HERV-K104P61576 105 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 RPL23AP62750 156 aaKnown RBP9.81□□□□□ -0.84
SLIRP-211ENST00000557623 CX3CL1P78423 397 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 CFHR3Q02985 330 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 TMEM267Q0VDI3 215 aaPredicted RBP9.81□□□□□ -0.84
SLIRP-211ENST00000557623 DYRK1AQ13627 763 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 VMA21Q3ZAQ7 101 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 DHRS11Q6UWP2 260 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 ZNF562Q6V9R5 426 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 OVCH2Q7RTZ1 564 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 TCTEX1D1Q8N7M0 179 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 DYNC2LI1Q8TCX1 351 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 SECTM1Q8WVN6 248 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 ISOC1Q96CN7 298 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 CITED4Q96RK1 184 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 SLC5A7Q9GZV3 580 aa9.81□□□□□ -0.84
SLIRP-211ENST00000557623 TRAV41A0A0B4J266 112 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 H3BMQ9 156 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 FCN1O00602 326 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 EREGO14944 169 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 FCGR3BO75015 233 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 CRYZL1O95825 349 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 CA2P00918 260 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 IGLV2-23P01705 113 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 PMP2P02689 132 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 RFX2P48378 723 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 CRIP2P52943 208 aaPredicted RBP9.8□□□□□ -0.84
SLIRP-211ENST00000557623 FXYD4P59646 89 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 PPP1R27Q86WC6 154 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 MFSD4AQ8N468 514 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 RNF152Q8N8N0 203 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 TEX45Q8NA69 505 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 OR6F1Q8NGZ6 308 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 ABHD5Q8WTS1 349 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 TCTEX1D2Q8WW35 142 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 CLCC1Q96S66 551 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 DCUN1D5Q9BTE7 237 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 CCL28Q9NRJ3 127 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 RABL2AQ9UBK7 228 aaPredicted RBP9.8□□□□□ -0.84
SLIRP-211ENST00000557623 RABL2BQ9UNT1 228 aa9.8□□□□□ -0.84
SLIRP-211ENST00000557623 WNK1Q9H4A3 2382 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 CCDC160A6NGH7 325 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 NUDT19A8MXV4 375 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 CREBL2O60519 120 aaPredicted RBP9.79□□□□□ -0.84
SLIRP-211ENST00000557623 PF4P02776 101 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 CRYGBP07316 175 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 HLA-DMAP28067 261 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 PPIFP30405 207 aaKnown RBP9.79□□□□□ -0.84
SLIRP-211ENST00000557623 HRH1P35367 487 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 KIR2DS2P43631 304 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 UBE2KP61086 200 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 RPL30P62888 115 aaKnown RBP9.79□□□□□ -0.84
SLIRP-211ENST00000557623 CATR1Q13166 79 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 EIF4EBP1Q13541 118 aaPredicted RBP9.79□□□□□ -0.84
SLIRP-211ENST00000557623 ACTBL2Q562R1 376 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 TMEM65Q6PI78 240 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 LYSMD2Q8IV50 215 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 OR4S2Q8NH73 311 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 MOB3AQ96BX8 217 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 ZNF2Q9BSG1 426 aaPredicted RBP9.79□□□□□ -0.84
SLIRP-211ENST00000557623 MIXL1Q9H2W2 232 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 TAS2R8Q9NYW2 309 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 WSB1Q9Y6I7 421 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 CEPT1Q9Y6K0 416 aa9.79□□□□□ -0.84
SLIRP-211ENST00000557623 FBN3Q75N90 2809 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 SRRM4A7MD48 611 aaKnown RBP9.78□□□□□ -0.84
SLIRP-211ENST00000557623 G3V318 75 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 CTDSP2O14595 271 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 CNIH1O95406 144 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 PSMB8P28062 276 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 TSPAN5P62079 268 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 MRPS10P82664 201 aaKnown RBP9.78□□□□□ -0.84
SLIRP-211ENST00000557623 NDPQ00604 133 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 FXYD3Q14802 87 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 ECSCRQ19T08 205 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 AKIRIN2Q53H80 203 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 PYHIN1Q6K0P9 492 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 TMEM17Q86X19 198 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 ZNF695Q8IW36 515 aa9.78□□□□□ -0.84
SLIRP-211ENST00000557623 LAX1Q8IWV1 398 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms