RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 HSPE1P61604 102 aaKnown RBP2.02□□□□□ -2.09
TRAV28-201ENST00000557548 DYNLL1P63167 89 aaKnown RBP2.02□□□□□ -2.09
TRAV28-201ENST00000557548 DEFA6Q01524 100 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 C1DQ13901 141 aaKnown RBP2.02□□□□□ -2.09
TRAV28-201ENST00000557548 ZNF404Q494X3 552 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 ATP6AP1LQ52LC2 224 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 TMEM78Q5T7P6 136 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 NANOGP8Q6NSW7 305 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 ZFP2Q6ZN57 461 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 TMPPEQ6ZT21 453 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 OOSP2Q86WS3 158 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 PDPNQ86YL7 162 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 ZNF567Q8N184 647 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 SLC35F6Q8N357 371 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 LRRC18Q8N456 261 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 OR9I1Q8NGQ6 314 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 LINC01560Q8TB33 94 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 ORAOV1Q8WV07 137 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 C1orf54Q8WWF1 131 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 CNBD2Q96M20 576 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 OR2A7Q96R45 310 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 KLF6Q99612 283 aaPredicted RBP2.02□□□□□ -2.09
TRAV28-201ENST00000557548 VPS25Q9BRG1 176 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 C2orf88Q9BSF0 95 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 TBL1XR1Q9BZK7 514 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 MAP1LC3BQ9GZQ8 125 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 LRTM1Q9HBL6 345 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 SND1-IT1Q9HBX3 110 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 UBQLN4Q9NRR5 601 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 RASL12Q9NYN1 266 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 SS18L2Q9UHA2 77 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 RSL24D1Q9UHA3 163 aaKnown RBP2.02□□□□□ -2.09
TRAV28-201ENST00000557548 CELA1Q9UNI1 258 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 AKAP12Q02952 1782 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 NRAPQ86VF7 1730 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.02□□□□□ -2.09
TRAV28-201ENST00000557548 IQGAP3Q86VI3 1631 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 PTPN23Q9H3S7 1636 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 UNC13BO14795 1591 aa2.02□□□□□ -2.09
TRAV28-201ENST00000557548 SLIT1O75093 1534 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 EHBP1L1Q8N3D4 1523 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 A2MP01023 1474 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 PZPP20742 1482 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 SHANK2Q9UPX8 1470 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 NPATQ14207 1427 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 SPEF2Q9C093 1822 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 A0A1B0GV90 55 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 C5orf49A4QMS7 147 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 PGPA6NDG6 321 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 BTNL10A8MVZ5 291 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 FAM25AB3EWG3 89 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 FAM25CB3EWG5 89 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 FAM25GB3EWG6 89 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 EEF1E1-BLOC1S5C9J1V9 151 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 G3V2T6 193 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 K7EP13 123 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 K7EPK0 472 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 M0QYV0 167 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 COPEO14579 308 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 FFAR1O14842 300 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 HMGB3O15347 200 aaKnown RBP2.01□□□□□ -2.09
TRAV28-201ENST00000557548 EEF1E1O43324 174 aaKnown RBP2.01□□□□□ -2.09
TRAV28-201ENST00000557548 TPST1O60507 370 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 PDCD6O75340 191 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 OR2J2O76002 312 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 HBZP02008 142 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 APOA2P02652 100 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 REG1AP05451 166 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 BPGMP07738 259 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 CECR9P0C854 216 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 ESDP10768 282 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 ZNF708P17019 499 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 CXCL2P19875 107 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 GZMHP20718 246 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 OPRK1P41145 380 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 MAP2K4P45985 399 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 TPI1P60174 286 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 C1QTNF8P60827 252 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 MEF2CQ06413 473 aaPredicted RBP2.01□□□□□ -2.09
TRAV28-201ENST00000557548 PMAIP1Q13794 54 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 PAFAH1B3Q15102 231 aaKnown RBP2.01□□□□□ -2.09
TRAV28-201ENST00000557548 UBE2NLQ5JXB2 153 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 CLLU1OSQ5K130 101 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 AKR1C8PQ5T2L2 129 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 LPCAT3Q6P1A2 487 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 NEGR1Q7Z3B1 354 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 DOLPP1Q86YN1 238 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 ST6GALNAC3Q8NDV1 305 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 OR52L1Q8NGH7 329 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 OR9A2Q8NGT5 310 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 OR5J2Q8NH18 312 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 ZNRF2Q8NHG8 242 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 GNPDA2Q8TDQ7 276 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 SRSF12Q8WXF0 261 aaKnown RBP2.01□□□□□ -2.09
TRAV28-201ENST00000557548 FXYD5Q96DB9 178 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 L3HYPDHQ96EM0 354 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 DNAJC30Q96LL9 226 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 LINC01587Q99440 93 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 C12orf57Q99622 126 aa2.01□□□□□ -2.09
TRAV28-201ENST00000557548 TBL1YQ9BQ87 522 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms