RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 RGS5O15539 181 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 PLXNB1O43157 2135 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 SLC25A17O43808 307 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 IGLV2-14P01704 120 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 IGHG4P01861 327 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 RCVRNP35243 200 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 HERV-K104P61576 105 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 RPL23AP62750 156 aaKnown RBP9.81□□□□□ -0.84
SLIRP-209ENST00000557342 CX3CL1P78423 397 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 CFHR3Q02985 330 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 TMEM267Q0VDI3 215 aaPredicted RBP9.81□□□□□ -0.84
SLIRP-209ENST00000557342 DYRK1AQ13627 763 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 VMA21Q3ZAQ7 101 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 DHRS11Q6UWP2 260 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 ZNF562Q6V9R5 426 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 OVCH2Q7RTZ1 564 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 TCTEX1D1Q8N7M0 179 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 SECTM1Q8WVN6 248 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 SLC5A7Q9GZV3 580 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 NXF2Q9GZY0 626 aaKnown RBP9.81□□□□□ -0.84
SLIRP-209ENST00000557342 TRAV41A0A0B4J266 112 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 FCN1O00602 326 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 FCGR3BO75015 233 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 CRYZL1O95825 349 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 CA2P00918 260 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 IGLV2-23P01705 113 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 PMP2P02689 132 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 RFX2P48378 723 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 CRIP2P52943 208 aaPredicted RBP9.8□□□□□ -0.84
SLIRP-209ENST00000557342 FXYD4P59646 89 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 PPP1R27Q86WC6 154 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 MFSD4AQ8N468 514 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 RNF152Q8N8N0 203 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 TEX45Q8NA69 505 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 OR6F1Q8NGZ6 308 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 ABHD5Q8WTS1 349 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 TCTEX1D2Q8WW35 142 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 CLCC1Q96S66 551 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 CCL28Q9NRJ3 127 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 RABL2AQ9UBK7 228 aaPredicted RBP9.8□□□□□ -0.84
SLIRP-209ENST00000557342 RABL2BQ9UNT1 228 aa9.8□□□□□ -0.84
SLIRP-209ENST00000557342 WNK1Q9H4A3 2382 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 NUDT19A8MXV4 375 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 CREBL2O60519 120 aaPredicted RBP9.79□□□□□ -0.84
SLIRP-209ENST00000557342 PF4P02776 101 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 CRYGBP07316 175 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 HLA-DMAP28067 261 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 PPIFP30405 207 aaKnown RBP9.79□□□□□ -0.84
SLIRP-209ENST00000557342 HRH1P35367 487 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 KIR2DS2P43631 304 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 UBE2KP61086 200 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 RPL30P62888 115 aaKnown RBP9.79□□□□□ -0.84
SLIRP-209ENST00000557342 CATR1Q13166 79 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 EIF4EBP1Q13541 118 aaPredicted RBP9.79□□□□□ -0.84
SLIRP-209ENST00000557342 ACTBL2Q562R1 376 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 TMEM65Q6PI78 240 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 LINC00299Q6ZSB3 139 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 LYSMD2Q8IV50 215 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 OR4S2Q8NH73 311 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 MOB3AQ96BX8 217 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 ZNF2Q9BSG1 426 aaPredicted RBP9.79□□□□□ -0.84
SLIRP-209ENST00000557342 MIXL1Q9H2W2 232 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 TAS2R8Q9NYW2 309 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 WSB1Q9Y6I7 421 aa9.79□□□□□ -0.84
SLIRP-209ENST00000557342 SRRM4A7MD48 611 aaKnown RBP9.78□□□□□ -0.84
SLIRP-209ENST00000557342 G3V318 75 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 CTDSP2O14595 271 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 CNIH1O95406 144 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 RPLP1P05386 114 aaKnown RBP9.78□□□□□ -0.84
SLIRP-209ENST00000557342 PSMB8P28062 276 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 TSPAN5P62079 268 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 MRPS10P82664 201 aaKnown RBP9.78□□□□□ -0.84
SLIRP-209ENST00000557342 NDPQ00604 133 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 FXYD3Q14802 87 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 ECSCRQ19T08 205 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 AKIRIN2Q53H80 203 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 PYHIN1Q6K0P9 492 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 TMEM17Q86X19 198 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 ZNF695Q8IW36 515 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 LAX1Q8IWV1 398 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 MINDY2Q8NBR6 621 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 KLHL30-AS1Q8NEE0 82 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 MCFD2Q8NI22 146 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 FCAMRQ8WWV6 532 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 ARPC1AQ92747 370 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 AIFM2Q9BRQ8 373 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 TPSG1Q9NRR2 321 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 FOXA2Q9Y261 457 aaPredicted RBP9.78□□□□□ -0.84
SLIRP-209ENST00000557342 NUBP2Q9Y5Y2 271 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 TRRAPQ9Y4A5 3859 aa9.78□□□□□ -0.84
SLIRP-209ENST00000557342 A0A1W2PN81 502 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 TNFSF12O43508 249 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 IGLV1-40P01703 118 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 EGR2P11161 476 aaPredicted RBP9.77□□□□□ -0.85
SLIRP-209ENST00000557342 CD33P20138 364 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 TBPP20226 339 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 CD40LGP29965 261 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 CHRNA7P36544 502 aa9.77□□□□□ -0.85
SLIRP-209ENST00000557342 CDX1P47902 265 aaPredicted RBP9.77□□□□□ -0.85
SLIRP-209ENST00000557342 C19orf54Q5BKX5 351 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms