RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 FCGR2BP31994 310 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-223ENST00000557076 OR3A3P47888 321 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 HTD2P86397 168 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 ALKBH1Q13686 389 aaKnown RBP3.39□□□□□ -1.87
SCFD1-223ENST00000557076 MED22Q15528 200 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 FAM106AQ4KMX7 169 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 NHLRC3Q5JS37 347 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 TMEM244Q5VVB8 128 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 FAM71F2Q6NXP2 309 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 ASCL4Q6XD76 172 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 ZNF497Q6ZNH5 498 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 PLEKHG7Q6ZR37 379 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 RBPMS2Q6ZRY4 209 aaKnown RBP3.39□□□□□ -1.87
SCFD1-223ENST00000557076 ZNF367Q7RTV3 350 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 TMEM179BQ7Z7N9 219 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 ZNF554Q86TJ5 538 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 FAM223AQ8IWN6 122 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 TCEANCQ8N8B7 351 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 SETD9Q8NE22 299 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 OR10V1Q8NGI7 309 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 OR5D18Q8NGL1 313 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 OR13C5Q8NGS8 318 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 GRPEL2Q8TAA5 225 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 C18orf15Q96N68 181 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 CLCC1Q96S66 551 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 FEVQ99581 238 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 SPAG8Q99932 426 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-223ENST00000557076 NIPSNAP1Q9BPW8 284 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 NDUFAF3Q9BU61 184 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 TEX12Q9BXU0 123 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 C6orf62Q9GZU0 229 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-223ENST00000557076 TMBIM4Q9HC24 238 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 CLN6Q9NWW5 311 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 METTL1Q9UBP6 276 aaKnown RBP3.39□□□□□ -1.87
SCFD1-223ENST00000557076 MLXQ9UH92 298 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 ENOPH1Q9UHY7 261 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 ZNF230Q9UIE0 474 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-223ENST00000557076 LRRC42Q9Y546 428 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 LOC107986453A0A1B0GWG9 222 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 TMEM213A2RRL7 107 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 METTL15A6NJ78 407 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 ZNF670-ZNF695F2Z2N8 137 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 H0YJW9 148 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 TSPAN4O14817 238 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 RAB29O14966 203 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 DEFB4AO15263 64 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 YPEL1O60688 119 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 EDF1O60869 148 aaKnown RBP3.38□□□□□ -1.87
SCFD1-223ENST00000557076 GGCTO75223 188 aaKnown RBP3.38□□□□□ -1.87
SCFD1-223ENST00000557076 AMBPP02760 352 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 CD74P04233 296 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 KRT8P05787 483 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 RPL35AP18077 110 aaKnown RBP3.38□□□□□ -1.87
SCFD1-223ENST00000557076 EDN2P20800 178 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 HLA-DMBP28068 263 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 CCR9P51686 369 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 CMC4P56277 68 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-223ENST00000557076 ADARB1P78563 741 aaKnown RBP3.38□□□□□ -1.87
SCFD1-223ENST00000557076 RPL36AP83881 106 aaKnown RBP3.38□□□□□ -1.87
SCFD1-223ENST00000557076 RNF212Q495C1 297 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 C6orf141Q5SZD1 244 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 ATAD3CQ5T2N8 411 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 C6orf183Q5T699 404 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 SYT6Q5T7P8 510 aaPredicted RBP3.38□□□□□ -1.87
SCFD1-223ENST00000557076 OR4A47Q6IF82 309 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 TRAT1Q6PIZ9 186 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 LINC00596Q86U02 117 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 SLC35F2Q8IXU6 374 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 GAPTQ8N292 157 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 CENPSQ8N2Z9 138 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 PRSS35Q8N3Z0 413 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 STX19Q8N4C7 294 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 NECAP1Q8NC96 275 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 OR5D14Q8NGL3 314 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 OR1L1Q8NH94 360 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 KCNG3Q8TAE7 436 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 MARC2Q969Z3 335 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 MRPS24Q96EL2 167 aaKnown RBP3.38□□□□□ -1.87
SCFD1-223ENST00000557076 YPEL2Q96QA6 119 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 CNN2Q99439 309 aaKnown RBP3.38□□□□□ -1.87
SCFD1-223ENST00000557076 TSNAXQ99598 290 aaKnown RBP3.38□□□□□ -1.87
SCFD1-223ENST00000557076 TTTY10Q9BZA0 68 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 C5orf66Q9H5L9 145 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 COA4Q9NYJ1 87 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 MRPL27Q9P0M9 148 aaKnown RBP3.38□□□□□ -1.87
SCFD1-223ENST00000557076 PIPOXQ9P0Z9 390 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 TRAPPC2LQ9UL33 140 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 ING4Q9UNL4 249 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 ST3GAL6Q9Y274 331 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 EXOSC1Q9Y3B2 195 aaKnown RBP3.38□□□□□ -1.87
SCFD1-223ENST00000557076 WASHC3Q9Y3C0 194 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 V9GYQ6 96 aa3.38□□□□□ -1.87
SCFD1-223ENST00000557076 RNF213Q63HN8 5207 aa3.37□□□□□ -1.87
SCFD1-223ENST00000557076 IGLV2-18A0A075B6J9 118 aa3.37□□□□□ -1.87
SCFD1-223ENST00000557076 DEFB131BA0A096LNP1 70 aa3.37□□□□□ -1.87
SCFD1-223ENST00000557076 SAA2-SAA4A0A096LPE2 208 aa3.37□□□□□ -1.87
SCFD1-223ENST00000557076 ZNF320A2RRD8 509 aa3.37□□□□□ -1.87
SCFD1-223ENST00000557076 A8MWP6 167 aa3.37□□□□□ -1.87
SCFD1-223ENST00000557076 H7C2Y5 167 aa3.37□□□□□ -1.87
SCFD1-223ENST00000557076 AIPO00170 330 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms