RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 A0A1W2PRX2 142 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 CCDC160A6NGH7 325 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 ATP6V0E1O15342 81 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 SLC25A17O43808 307 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 FCGR3BO75015 233 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 CRYZL1O95825 349 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 IGLV2-23P01705 113 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 IGHG4P01861 327 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 CRYGBP07316 175 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 ELANEP08246 267 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 HLA-DMAP28067 261 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 PPIFP30405 207 aaKnown RBP8.39□□□□□ -1.07
LINC00239-201ENST00000556973 SLC6A1P30531 599 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 HRH1P35367 487 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 CRIP2P52943 208 aaPredicted RBP8.39□□□□□ -1.07
LINC00239-201ENST00000556973 FXYD4P59646 89 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 HERV-K104P61576 105 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 TSPAN5P62079 268 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 RPL30P62888 115 aaKnown RBP8.39□□□□□ -1.07
LINC00239-201ENST00000556973 MRPS10P82664 201 aaKnown RBP8.39□□□□□ -1.07
LINC00239-201ENST00000556973 CFHR3Q02985 330 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 TMEM267Q0VDI3 215 aaPredicted RBP8.39□□□□□ -1.07
LINC00239-201ENST00000556973 FOXE3Q13461 319 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 LPCAT3Q6P1A2 487 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 LAX1Q8IWV1 398 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 TEX45Q8NA69 505 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 FCAMRQ8WWV6 532 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 CLCC1Q96S66 551 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 DCUN1D5Q9BTE7 237 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 SLIRPQ9GZT3 109 aaKnown RBP8.39□□□□□ -1.07
LINC00239-201ENST00000556973 PARP11Q9NR21 331 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 KLK11Q9UBX7 282 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 NUBP2Q9Y5Y2 271 aa8.39□□□□□ -1.07
LINC00239-201ENST00000556973 TRAV41A0A0B4J266 112 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 SRRM4A7MD48 611 aaKnown RBP8.38□□□□□ -1.07
LINC00239-201ENST00000556973 ZNF701M0R085 212 aaPredicted RBP8.38□□□□□ -1.07
LINC00239-201ENST00000556973 CA2P00918 260 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 EGR2P11161 476 aaPredicted RBP8.38□□□□□ -1.07
LINC00239-201ENST00000556973 GNRHRP30968 328 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 KIR2DS2P43631 304 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 UBE2KP61086 200 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 VMA21Q3ZAQ7 101 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 AKIRIN2Q53H80 203 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 ACTBL2Q562R1 376 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 CXorf66Q5JRM2 361 aaPredicted RBP8.38□□□□□ -1.07
LINC00239-201ENST00000556973 KHDC1LQ5JSQ8 128 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 PYHIN1Q6K0P9 492 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 TCTEX1D1Q8N7M0 179 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 RNF152Q8N8N0 203 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 MINDY2Q8NBR6 621 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 OR52I2Q8NH67 350 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 TCTEX1D2Q8WW35 142 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 MOB3AQ96BX8 217 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 DIRAS2Q96HU8 199 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 C6orf62Q9GZU0 229 aaPredicted RBP8.38□□□□□ -1.07
LINC00239-201ENST00000556973 NXF2Q9GZY0 626 aaKnown RBP8.38□□□□□ -1.07
LINC00239-201ENST00000556973 TAS2R8Q9NYW2 309 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 MTFP1Q9UDX5 166 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 RSL24D1Q9UHA3 163 aaKnown RBP8.38□□□□□ -1.07
LINC00239-201ENST00000556973 WSB1Q9Y6I7 421 aa8.38□□□□□ -1.07
LINC00239-201ENST00000556973 G3V318 75 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 GABARAPH6UMI1 98 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 CTDSPLO15194 276 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 CNIH1O95406 144 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 IGLV1-40P01703 118 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 IFNA6P05013 189 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 PF4V1P10720 104 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 PSMB8P28062 276 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 CDX1P47902 265 aaPredicted RBP8.37□□□□□ -1.07
LINC00239-201ENST00000556973 BRWD1-AS2P59051 145 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 RPL23AP62750 156 aaKnown RBP8.37□□□□□ -1.07
LINC00239-201ENST00000556973 CATR1Q13166 79 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 FXYD3Q14802 87 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 OR2B11Q5JQS5 317 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 TMEM65Q6PI78 240 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 ZNF818PQ6ZRF7 136 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 TMEM17Q86X19 198 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 OR4S2Q8NH73 311 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 MCFD2Q8NI22 146 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 ABHD5Q8WTS1 349 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 AIFM2Q9BRQ8 373 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 RBM38Q9H0Z9 239 aaKnown RBP8.37□□□□□ -1.07
LINC00239-201ENST00000556973 TPSG1Q9NRR2 321 aa8.37□□□□□ -1.07
LINC00239-201ENST00000556973 ARPC1BO15143 372 aaKnown RBP8.36□□□□□ -1.07
LINC00239-201ENST00000556973 TNFSF12O43508 249 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 CREBL2O60519 120 aaPredicted RBP8.36□□□□□ -1.07
LINC00239-201ENST00000556973 PGLYRP1O75594 196 aaPredicted RBP8.36□□□□□ -1.07
LINC00239-201ENST00000556973 HRASP01112 189 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 RPLP1P05386 114 aaKnown RBP8.36□□□□□ -1.07
LINC00239-201ENST00000556973 TBPP20226 339 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 CD40LGP29965 261 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 TNFSF8P32971 234 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 UCP3P55916 312 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 SSBP1Q04837 148 aaKnown RBP8.36□□□□□ -1.07
LINC00239-201ENST00000556973 PJVKQ0ZLH3 352 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 IL18Q14116 193 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 C19orf54Q5BKX5 351 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 VAX1Q5SQQ9 334 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 UNQ5815/PRO19632Q6UWF5 114 aa8.36□□□□□ -1.07
LINC00239-201ENST00000556973 ZNF695Q8IW36 515 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms