RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 LDLRAD2Q5SZI1 272 aa13.23□□□□□ -0.29
PCNX4-213ENST00000556907 ZNF66Q6ZN08 573 aa13.23□□□□□ -0.29
PCNX4-213ENST00000556907 LIAT1Q6ZQX7 453 aa13.23□□□□□ -0.29
PCNX4-213ENST00000556907 LYG1Q8N1E2 194 aa13.23□□□□□ -0.29
PCNX4-213ENST00000556907 MITD1Q8WV92 249 aa13.23□□□□□ -0.29
PCNX4-213ENST00000556907 HSD17B10Q99714 261 aaKnown RBP13.23□□□□□ -0.29
PCNX4-213ENST00000556907 ZNF251Q9BRH9 671 aa13.23□□□□□ -0.29
PCNX4-213ENST00000556907 ESM1Q9NQ30 184 aa13.23□□□□□ -0.29
PCNX4-213ENST00000556907 SHPKQ9UHJ6 478 aa13.23□□□□□ -0.29
PCNX4-213ENST00000556907 PITPNC1Q9UKF7 332 aa13.23□□□□□ -0.29
PCNX4-213ENST00000556907 RNF150Q9ULK6 438 aa13.23□□□□□ -0.29
PCNX4-213ENST00000556907 HILPDAQ9Y5L2 63 aa13.23□□□□□ -0.29
PCNX4-213ENST00000556907 OR5AC1P0C628 307 aa13.22□□□□□ -0.29
PCNX4-213ENST00000556907 ANXA3P12429 323 aa13.22□□□□□ -0.29
PCNX4-213ENST00000556907 F2RP25116 425 aa13.22□□□□□ -0.29
PCNX4-213ENST00000556907 ZNF833PQ6ZTB9 187 aa13.22□□□□□ -0.29
PCNX4-213ENST00000556907 TCTEX1D1Q8N7M0 179 aa13.22□□□□□ -0.29
PCNX4-213ENST00000556907 ST6GALNAC6Q969X2 333 aa13.22□□□□□ -0.29
PCNX4-213ENST00000556907 RAB18Q9NP72 206 aa13.22□□□□□ -0.29
PCNX4-213ENST00000556907 FAM212BQ9NTI7 297 aaPredicted RBP13.22□□□□□ -0.29
PCNX4-213ENST00000556907 C3orf85A0A1B0GTC6 90 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 TNFSF12O43508 249 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 IGHV4-59P01825 116 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 UCP1P25874 307 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 SRPXP78539 464 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 TMEM187Q14656 261 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 RPL39P5Q59GN2 51 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 DYNAPQ8N1N2 210 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 C12orf45Q8N5I9 185 aaPredicted RBP13.21□□□□□ -0.29
PCNX4-213ENST00000556907 LRTM2Q8N967 370 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 COQ8AQ8NI60 647 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 CASTOR1Q8WTX7 329 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 TMEM158Q8WZ71 300 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 TP53RKQ96S44 253 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 S1PR3Q99500 378 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 PHB2Q99623 299 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 MED28Q9H204 178 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 VPREB3Q9UKI3 123 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 KCNIP3Q9Y2W7 256 aa13.21□□□□□ -0.29
PCNX4-213ENST00000556907 CUBNO60494 3623 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 HMX3A6NHT5 357 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 DBX1A6NMT0 343 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 H3BUX3 64 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 M0R1X1 148 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 SSNA1O43805 119 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 PROP1O75360 226 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 SULT1A3P0DMM9 295 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 SULT1A4P0DMN0 295 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 DUTP33316 252 aaKnown RBP13.2□□□□□ -0.3
PCNX4-213ENST00000556907 THBS3P49746 956 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 ANKRD55Q3KP44 614 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 THNSL2Q86YJ6 484 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 OR51H1Q8NH63 302 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 ADTRPQ96IZ2 230 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 GPHA2Q96T91 129 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 TMEM222Q9H0R3 208 aa13.2□□□□□ -0.3
PCNX4-213ENST00000556907 TET2Q6N021 2002 aaPredicted RBP13.19□□□□□ -0.3
PCNX4-213ENST00000556907 LINC00473A8K010 186 aa13.19□□□□□ -0.3
PCNX4-213ENST00000556907 FAM106CPP0CH98 169 aa13.19□□□□□ -0.3
PCNX4-213ENST00000556907 KIR2DS2P43631 304 aa13.19□□□□□ -0.3
PCNX4-213ENST00000556907 HABP2Q14520 560 aaPredicted RBP13.19□□□□□ -0.3
PCNX4-213ENST00000556907 C16orf82Q7Z2V1 217 aa13.19□□□□□ -0.3
PCNX4-213ENST00000556907 TGIF2LXQ8IUE1 241 aa13.19□□□□□ -0.3
PCNX4-213ENST00000556907 PIFOQ8TCI5 191 aa13.19□□□□□ -0.3
PCNX4-213ENST00000556907 GLYATL2Q8WU03 294 aa13.19□□□□□ -0.3
PCNX4-213ENST00000556907 TCTEX1D2Q8WW35 142 aa13.19□□□□□ -0.3
PCNX4-213ENST00000556907 DDB2Q92466 427 aa13.19□□□□□ -0.3
PCNX4-213ENST00000556907 IL22RA2Q969J5 263 aa13.19□□□□□ -0.3
PCNX4-213ENST00000556907 TCF19Q9Y242 345 aa13.19□□□□□ -0.3
PCNX4-213ENST00000556907 PIGBOS1A0A0B4J2F0 54 aa13.18□□□□□ -0.3
PCNX4-213ENST00000556907 IGHV1-3A0A0C4DH29 117 aa13.18□□□□□ -0.3
PCNX4-213ENST00000556907 DUXBA0A1W2PPF3 345 aa13.18□□□□□ -0.3
PCNX4-213ENST00000556907 A0A1W2PPI3 338 aa13.18□□□□□ -0.3
PCNX4-213ENST00000556907 FAM90A9PA6NNJ1 464 aa13.18□□□□□ -0.3
PCNX4-213ENST00000556907 CRYBA1P05813 215 aa13.18□□□□□ -0.3
PCNX4-213ENST00000556907 RPL30P62888 115 aaKnown RBP13.18□□□□□ -0.3
PCNX4-213ENST00000556907 FCN2Q15485 313 aa13.18□□□□□ -0.3
PCNX4-213ENST00000556907 LGI3Q8N145 548 aa13.18□□□□□ -0.3
PCNX4-213ENST00000556907 TMEM56Q96MV1 263 aa13.18□□□□□ -0.3
PCNX4-213ENST00000556907 CHIAQ9BZP6 476 aa13.18□□□□□ -0.3
PCNX4-213ENST00000556907 PRR13Q9NZ81 148 aa13.18□□□□□ -0.3
PCNX4-213ENST00000556907 MGAT4CQ9UBM8 478 aa13.18□□□□□ -0.3
PCNX4-213ENST00000556907 TMEM56-RWDD3S4R434 201 aa13.18□□□□□ -0.3
PCNX4-213ENST00000556907 RBFOX2O43251 390 aaKnown RBP eCLIP13.17□□□□□ -0.3
PCNX4-213ENST00000556907 RPA2P15927 270 aa13.17□□□□□ -0.3
PCNX4-213ENST00000556907 HLA-GP17693 338 aa13.17□□□□□ -0.3
PCNX4-213ENST00000556907 CD1BP29016 333 aa13.17□□□□□ -0.3
PCNX4-213ENST00000556907 SP6Q3SY56 376 aa13.17□□□□□ -0.3
PCNX4-213ENST00000556907 OR11H7Q8NGC8 314 aa13.17□□□□□ -0.3
PCNX4-213ENST00000556907 OR5M8Q8NGP6 311 aa13.17□□□□□ -0.3
PCNX4-213ENST00000556907 LHFPL5Q8TAF8 219 aa13.17□□□□□ -0.3
PCNX4-213ENST00000556907 DUX5Q96PT3 197 aa13.17□□□□□ -0.3
PCNX4-213ENST00000556907 MRPL20Q9BYC9 149 aaKnown RBP13.17□□□□□ -0.3
PCNX4-213ENST00000556907 PRELID3BQ9Y3B1 194 aa13.17□□□□□ -0.3
PCNX4-213ENST00000556907 ATRQ13535 2644 aa13.16□□□□□ -0.3
PCNX4-213ENST00000556907 A6NDX4 124 aa13.16□□□□□ -0.3
PCNX4-213ENST00000556907 TIMM23O14925 209 aa13.16□□□□□ -0.3
PCNX4-213ENST00000556907 GPR137BO60478 399 aa13.16□□□□□ -0.3
PCNX4-213ENST00000556907 CDS2O95674 445 aa13.16□□□□□ -0.3
PCNX4-213ENST00000556907 TAGLNQ01995 201 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms