RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 AKIP1Q9NQ31 210 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 ZC4H2Q9NQZ6 224 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 PLEKHJ1Q9NW61 149 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 AK3Q9UIJ7 227 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 EXOSC1Q9Y3B2 195 aaKnown RBP6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 RYR1P21817 5038 aa6.77□□□□□ -1.33
HNRNPC-227ENST00000556897 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 A0A0A6YYD4 124 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 TRBV6-6A0A0A6YYG2 114 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 IGKV1-6A0A0C4DH72 117 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 IRGMA1A4Y4 181 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 FAM223BA6NKX1 122 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 SRRM4A7MD48 611 aaKnown RBP6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 PPP5D1E7EU14 171 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 SHOXO15266 292 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 MPPED1O15442 326 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 HLA-AP01891 365 aaKnown RBP6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 UBBP0CG47 229 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 ZNF45Q02386 682 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 INSL4Q14641 139 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 IDO2Q6ZQW0 420 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 FAM223AQ8IWN6 122 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 TMEM61Q8N0U2 210 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 CACNG8Q8WXS5 425 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 THRSPQ92748 146 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 TMEM80Q96HE8 168 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 C9orf16Q9BUW7 83 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 TM2D1Q9BX74 207 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 RIMS4Q9H426 269 aaPredicted RBP6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 Q9N2K0 584 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 RDH8Q9NYR8 311 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 TECRQ9NZ01 308 aaKnown RBP6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 PFDN2Q9UHV9 154 aa6.76□□□□□ -1.33
HNRNPC-227ENST00000556897 LOC102724200A0A096LPH7 203 aaPredicted RBP6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 TRBV9A0A0B4J1U6 114 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 SOCS1O15524 211 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 TUSC2O75896 110 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 CELP19835 753 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 CBLN1P23435 193 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 TAS2R43P59537 309 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 TNXAQ16473 311 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 PRSS8Q16651 343 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 C15orf32Q32M92 178 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 LYG2Q86SG7 212 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 OR52B4Q8NGK2 314 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 SRSF12Q8WXF0 261 aaKnown RBP6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 GGHQ92820 318 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 VCXQ9H320 206 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 C12orf4Q9NQ89 552 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 SDHAF2Q9NX18 166 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 DMRT1Q9Y5R6 373 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 DNAH10Q8IVF4 4471 aa6.75□□□□□ -1.33
HNRNPC-227ENST00000556897 HECTD4Q9Y4D8 3996 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 TMEM14DPA8MWL7 114 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 ATP5HO75947 161 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 OR2J3O76001 311 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 SCAF4O95104 1147 aaKnown RBP6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 OR2C1O95371 312 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 CD3GP09693 182 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 MAPK3P27361 379 aaPredicted RBP6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 RANBP1P43487 201 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 PSMD7P51665 324 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 QRFPP83859 136 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 TNFRSF9Q07011 255 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 CBX3Q13185 183 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 MED21Q13503 144 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 RTL8BQ17RB0 113 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 TMEM177Q53S58 311 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 C1orf100Q5SVJ3 147 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 GLT8D1Q68CQ7 371 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 ZNF57Q68EA5 555 aaPredicted RBP6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 ZFP1Q6P2D0 407 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 LRRTM1Q86UE6 522 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 NECAP1Q8NC96 275 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 ZNF555Q8NEP9 628 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 ACOT12Q8WYK0 555 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 OR2D2Q9H210 308 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 VCX3BQ9H321 246 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 VCX3AQ9NNX9 186 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 MGAT4AQ9UM21 535 aa6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 KLK5Q9Y337 293 aaPredicted RBP6.74□□□□□ -1.33
HNRNPC-227ENST00000556897 ZNF320A2RRD8 509 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 TMEM213A2RRL7 107 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 TRDCB7Z8K6 153 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 LGALS9O00182 355 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 GGCTO75223 188 aaKnown RBP6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 NDUFB8O95169 186 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 IGHV3-23P01764 117 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 SRMP19623 302 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 BMI1P35226 326 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 UBE2KP61086 200 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 ST3GAL4Q11206 333 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 DEFB135Q30KP9 77 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 VMA21Q3ZAQ7 101 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 ACSM3Q53FZ2 586 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 TM4SF20Q53R12 229 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 RBM48Q5RL73 367 aaKnown RBP6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 C10orf55Q5SWW7 151 aa6.73□□□□□ -1.33
HNRNPC-227ENST00000556897 TTC23Q5W5X9 447 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms