RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 RPL23P62829 140 aaKnown RBP12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 PDPNQ86YL7 162 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 ZDHHC16Q969W1 377 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 hADV38S2A0JD32 116 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 WIPI2Q9Y4P8 454 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 IGKV1-27A0A075B6S5 117 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 TNFRSF1AP19438 455 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 ERVFRD-1P60508 538 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 TFF3Q07654 80 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 HES7Q9BYE0 225 aa12.78□□□□□ -0.36
ARHGEF40-207ENST00000556399 ODAMA1E959 279 aa12.77□□□□□ -0.36
ARHGEF40-207ENST00000556399 CEACAM18A8MTB9 384 aa12.77□□□□□ -0.36
ARHGEF40-207ENST00000556399 WISP1O95388 367 aa12.77□□□□□ -0.36
ARHGEF40-207ENST00000556399 HTR1DP28221 377 aa12.77□□□□□ -0.36
ARHGEF40-207ENST00000556399 LCN2P80188 198 aa12.77□□□□□ -0.36
ARHGEF40-207ENST00000556399 PYY3Q5JQD4 70 aa12.77□□□□□ -0.36
ARHGEF40-207ENST00000556399 OR51B2Q9Y5P1 312 aa12.77□□□□□ -0.36
ARHGEF40-207ENST00000556399 B4E171 279 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 SOD3P08294 240 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 TSPAN7P41732 249 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 Q56UQ5 140 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 OR4B1Q8NGF8 309 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 BCL2L2Q92843 193 aaPredicted RBP12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 ATG101Q9BSB4 218 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 SPATA45Q537H7 98 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 C10orf91Q5T1B1 145 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 PMS2CLQ68D20 193 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 NABP1Q96AH0 204 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 HIST1H2BLQ99880 126 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 GAL3ST2Q9H3Q3 398 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 ZNF355PQ9NSJ1 428 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 A0A0G2JMM0 328 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 A0A1W2PPB8 328 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 A0A1W2PRS3 328 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 KIR3DP1A8MWS1 328 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 PRRG2O14669 202 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 CRYGSP22914 178 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 P2RY6Q15077 328 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 ETFRF1Q6IPR1 90 aa12.77□□□□□ -0.37
ARHGEF40-207ENST00000556399 NDUFB3O43676 98 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 CBLN1P23435 193 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 MFAP2P55001 183 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 OR2D3Q8NGH3 330 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 OR1B1Q8NGR6 318 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 VSIRQ9H7M9 311 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 C21orf140B9A014 251 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 SNRNP200O75643 2136 aaKnown RBP12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 TMEM11P17152 192 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 LRRC10Q5BKY1 277 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 CDCP2Q5VXM1 449 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 PQLC2Q6ZP29 291 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 C11orf42Q8N5U0 333 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 OR5R1Q8NH85 324 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 ZNF581Q9P0T4 197 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 CD99P14209 185 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 WNT5AP41221 380 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 IBA57Q5T440 356 aaKnown RBP12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 TMEM45BQ96B21 275 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 LINC00470Q9BZP3 86 aa12.76□□□□□ -0.37
ARHGEF40-207ENST00000556399 GDF9O60383 454 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 RBP4P02753 201 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 CSN3P07498 182 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 ABHD12Q8N2K0 398 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 GSX1Q9H4S2 264 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 PHF3Q92576 2039 aaKnown RBP12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 KIAA1644Q3SXP7 199 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 C10orf113Q5VZT2 155 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 MOB3BQ86TA1 216 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 TMEM191AQ9H0A3 160 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 A0A1W2PN81 502 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 MKRN2OSH3BPM6 223 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 FXYD3Q14802 87 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 MRPL14Q6P1L8 145 aaKnown RBP12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 PRSS3P2Q8NHM4 247 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 WDYHV1Q96HA8 205 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 IMMP1LQ96LU5 166 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 NDUFAF3Q9BU61 184 aa12.75□□□□□ -0.37
ARHGEF40-207ENST00000556399 MGST3O14880 152 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 BHLHA15Q7RTS1 189 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 MMD2Q8IY49 270 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 VKORC1L1Q8N0U8 176 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 TMEM171Q8WVE6 324 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 TMEM140Q9NV12 185 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 PPP1R14DQ9NXH3 145 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 SIAH2O43255 324 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 CSRP1P21291 193 aaKnown RBP12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 SSTR5P35346 364 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 ZIC4Q8N9L1 334 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 HARBI1Q96MB7 349 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 DOCK9Q9BZ29 2069 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 TMPRSS2O15393 492 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 P01737 135 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 HIST1H1EP10412 219 aaKnown RBP12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 JOSD1Q15040 202 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 VSTM2AQ8TAG5 236 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 TMEM170AQ8WVE7 144 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 LTBRP36941 435 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 ATP5G3P48201 142 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 HERPUD1Q15011 391 aa12.74□□□□□ -0.37
ARHGEF40-207ENST00000556399 FGFBP3Q8TAT2 258 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms