RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 OR4F5Q8NH21 305 aa11.27□□□□□ -0.6
SNX6-206ENST00000556162 ZFAND1Q8TCF1 268 aa11.27□□□□□ -0.6
SNX6-206ENST00000556162 CCDC32Q9BV29 185 aa11.27□□□□□ -0.6
SNX6-206ENST00000556162 WDR12Q9GZL7 423 aaKnown RBP11.27□□□□□ -0.6
SNX6-206ENST00000556162 SLC2A8Q9NY64 477 aa11.27□□□□□ -0.6
SNX6-206ENST00000556162 KIAA1456Q9P272 454 aa11.27□□□□□ -0.6
SNX6-206ENST00000556162 NBR2O15453 112 aa11.27□□□□□ -0.61
SNX6-206ENST00000556162 PEX14O75381 377 aa11.27□□□□□ -0.61
SNX6-206ENST00000556162 AMY1AP04745 511 aa11.27□□□□□ -0.61
SNX6-206ENST00000556162 CD40LGP29965 261 aa11.27□□□□□ -0.61
SNX6-206ENST00000556162 FOXL1Q12952 345 aa11.27□□□□□ -0.61
SNX6-206ENST00000556162 PHLDA2Q53GA4 152 aa11.27□□□□□ -0.61
SNX6-206ENST00000556162 OR2B11Q5JQS5 317 aa11.27□□□□□ -0.61
SNX6-206ENST00000556162 C5orf56Q8N8D9 126 aa11.27□□□□□ -0.61
SNX6-206ENST00000556162 POC5Q8NA72 575 aa11.27□□□□□ -0.61
SNX6-206ENST00000556162 MARCH1Q8TCQ1 289 aa11.27□□□□□ -0.61
SNX6-206ENST00000556162 ZNF486Q96H40 463 aaPredicted RBP11.27□□□□□ -0.61
SNX6-206ENST00000556162 TSNAXQ99598 290 aaKnown RBP11.27□□□□□ -0.61
SNX6-206ENST00000556162 RASL11BQ9BPW5 248 aa11.27□□□□□ -0.61
SNX6-206ENST00000556162 COL6A5A8TX70 2615 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 TMEM89A2RUT3 159 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 SHOXO15266 292 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 CRYZL1O95825 349 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 CNTFRP26992 372 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 KIR2DS2P43631 304 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 LGALS7P47929 136 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 TMEM177Q53S58 311 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 C9orf152Q5JTZ5 239 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 Q8N9W7 124 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 NPBQ8NG41 125 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 OR51H1Q8NH63 302 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 OR2T6Q8NHC8 308 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 C16orf95Q9H693 158 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 BEX1Q9HBH7 125 aa11.26□□□□□ -0.61
SNX6-206ENST00000556162 LINC00854A0A1B0GVQ3 168 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 CENPXA8MT69 81 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 RLN1P04808 185 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 SURF2Q15527 256 aaPredicted RBP11.25□□□□□ -0.61
SNX6-206ENST00000556162 ARSJQ5FYB0 599 aaPredicted RBP11.25□□□□□ -0.61
SNX6-206ENST00000556162 SPAG16Q8N0X2 631 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 OR13C8Q8NGS7 320 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 OR4S2Q8NH73 311 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 OSR1Q8TAX0 266 aaPredicted RBP11.25□□□□□ -0.61
SNX6-206ENST00000556162 HARBI1Q96MB7 349 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 SCGB3A2Q96PL1 93 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 SLC2A9Q9NRM0 540 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 LIN7CQ9NUP9 197 aaKnown RBP11.25□□□□□ -0.61
SNX6-206ENST00000556162 A0A1B0GUS0 222 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 NAP1L6A6NFF2 107 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 SH2D7A6NKC9 451 aaPredicted RBP11.25□□□□□ -0.61
SNX6-206ENST00000556162 PI3P19957 117 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 FAM71E2Q8N5Q1 922 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 CD300LFQ8TDQ1 290 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 MRGPRFQ96AM1 343 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 MDFIQ99750 246 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 ZNF702PQ9H963 129 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 COPZ2Q9P299 210 aa11.25□□□□□ -0.61
SNX6-206ENST00000556162 C14orf166Q9Y224 244 aaKnown RBP11.25□□□□□ -0.61
SNX6-206ENST00000556162 CLPSL1A2RUU4 121 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 RRHO14718 337 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 NDUFA3O95167 84 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 SPDEFO95238 335 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 CTSDP07339 412 aaPredicted RBP11.24□□□□□ -0.61
SNX6-206ENST00000556162 MDKP21741 143 aaPredicted RBP11.24□□□□□ -0.61
SNX6-206ENST00000556162 PIGPP57054 158 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 BRWD1-AS2P59051 145 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 RND3P61587 244 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 PLGLAQ15195 96 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 PSG5Q15238 335 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 C5orf64Q2M2E5 130 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 Q6ZS46 218 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 TBC1D26Q86UD7 250 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 Q8N2B8 174 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 LINC01006Q8NI28 216 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 C7orf50Q9BRJ6 194 aaKnown RBP11.24□□□□□ -0.61
SNX6-206ENST00000556162 GPR132Q9UNW8 380 aa11.24□□□□□ -0.61
SNX6-206ENST00000556162 MPPED1O15442 326 aa11.23□□□□□ -0.61
SNX6-206ENST00000556162 RBFOX2O43251 390 aaKnown RBP eCLIP11.23□□□□□ -0.611e-8■■■■■ 29.5
SNX6-206ENST00000556162 F2RP25116 425 aa11.23□□□□□ -0.61
SNX6-206ENST00000556162 LIN54Q6MZP7 749 aa11.23□□□□□ -0.61
SNX6-206ENST00000556162 TCTEX1D1Q8N7M0 179 aa11.23□□□□□ -0.61
SNX6-206ENST00000556162 CCDC71LQ8N9Z2 235 aa11.23□□□□□ -0.61
SNX6-206ENST00000556162 FBXL15Q9H469 300 aa11.23□□□□□ -0.61
SNX6-206ENST00000556162 METTL1Q9UBP6 276 aaKnown RBP11.23□□□□□ -0.61
SNX6-206ENST00000556162 SIGLEC9Q9Y336 463 aa11.23□□□□□ -0.61
SNX6-206ENST00000556162 SRRM4A7MD48 611 aaKnown RBP11.23□□□□□ -0.61
SNX6-206ENST00000556162 SLC25A17O43808 307 aa11.23□□□□□ -0.61
SNX6-206ENST00000556162 RAMP3O60896 148 aa11.23□□□□□ -0.61
SNX6-206ENST00000556162 AWAT1Q58HT5 328 aa11.23□□□□□ -0.61
SNX6-206ENST00000556162 SLC25A21Q9BQT8 299 aaPredicted RBP11.23□□□□□ -0.61
SNX6-206ENST00000556162 AIFM2Q9BRQ8 373 aa11.23□□□□□ -0.61
SNX6-206ENST00000556162 RTBDNQ9BSG5 229 aaPredicted RBP11.23□□□□□ -0.61
SNX6-206ENST00000556162 RNF114Q9Y508 228 aa11.23□□□□□ -0.61
SNX6-206ENST00000556162 MMP24Q9Y5R2 645 aa11.23□□□□□ -0.61
SNX6-206ENST00000556162 HPRT1P00492 218 aa11.22□□□□□ -0.61
SNX6-206ENST00000556162 HRASP01112 189 aa11.22□□□□□ -0.61
SNX6-206ENST00000556162 IGLV2-23P01705 113 aa11.22□□□□□ -0.61
SNX6-206ENST00000556162 VDAC2P45880 294 aaPredicted RBP11.22□□□□□ -0.61
SNX6-206ENST00000556162 COMPP49747 757 aaPredicted RBP11.22□□□□□ -0.61
SNX6-206ENST00000556162 VMA21Q3ZAQ7 101 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms