RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 A0A1W2PPE3 182 aa12.07□□□□□ -0.48
VPS33B-205ENST00000556096 FAM90A9PA6NNJ1 464 aa12.07□□□□□ -0.48
VPS33B-205ENST00000556096 NXPH3O95157 252 aa12.07□□□□□ -0.48
VPS33B-205ENST00000556096 DLX6P56179 175 aa12.07□□□□□ -0.48
VPS33B-205ENST00000556096 TMEM155Q4W5P6 130 aa12.07□□□□□ -0.48
VPS33B-205ENST00000556096 ZNF841Q6ZN19 808 aa12.07□□□□□ -0.48
VPS33B-205ENST00000556096 ZNF295-AS1Q8N0V1 137 aa12.07□□□□□ -0.48
VPS33B-205ENST00000556096 LYG1Q8N1E2 194 aa12.07□□□□□ -0.48
VPS33B-205ENST00000556096 C8orf31Q8N9H6 132 aa12.07□□□□□ -0.48
VPS33B-205ENST00000556096 TMED6Q8WW62 240 aa12.07□□□□□ -0.48
VPS33B-205ENST00000556096 HSPB7Q9UBY9 170 aa12.07□□□□□ -0.48
VPS33B-205ENST00000556096 PFDN2Q9UHV9 154 aa12.07□□□□□ -0.48
VPS33B-205ENST00000556096 DCHS2Q6V1P9 2916 aa12.07□□□□□ -0.48
VPS33B-205ENST00000556096 A0A1W2PPR1 153 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 MARCH11A6NNE9 402 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 TXNL1O43396 289 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 MED6O75586 246 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 FAM157CP0CG43 387 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 GNG10P50151 68 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 TNFRSF9Q07011 255 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 ZNF596Q8TC21 504 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 R3HDM4Q96D70 268 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 REG4Q9BYZ8 158 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 CRYBG3Q68DQ2 2970 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 UBE2KP61086 200 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 LINC00311Q8N616 119 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 OR4S2Q8NH73 311 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 RAB1CQ92928 201 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 GINS3Q9BRX5 216 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 BARX1Q9HBU1 254 aaPredicted RBP12.06□□□□□ -0.48
VPS33B-205ENST00000556096 MIOXQ9UGB7 285 aa12.06□□□□□ -0.48
VPS33B-205ENST00000556096 USF3Q68DE3 2245 aa12.05□□□□□ -0.48
VPS33B-205ENST00000556096 A0A087X0M5 115 aa12.05□□□□□ -0.48
VPS33B-205ENST00000556096 A0A1B0GX30 115 aa12.05□□□□□ -0.48
VPS33B-205ENST00000556096 MFSD2BA6NFX1 497 aa12.05□□□□□ -0.48
VPS33B-205ENST00000556096 A6NNC1 897 aa12.05□□□□□ -0.48
VPS33B-205ENST00000556096 NQO2P16083 231 aa12.05□□□□□ -0.48
VPS33B-205ENST00000556096 ZNF266Q14584 549 aa12.05□□□□□ -0.48
VPS33B-205ENST00000556096 AANATQ16613 207 aa12.05□□□□□ -0.48
VPS33B-205ENST00000556096 AARDQ4LEZ3 155 aa12.05□□□□□ -0.48
VPS33B-205ENST00000556096 MARVELD3Q96A59 401 aa12.05□□□□□ -0.48
VPS33B-205ENST00000556096 TIMD4Q96H15 378 aa12.05□□□□□ -0.48
VPS33B-205ENST00000556096 SPOCK3Q9BQ16 436 aa12.05□□□□□ -0.48
VPS33B-205ENST00000556096 PSENENQ9NZ42 101 aa12.05□□□□□ -0.48
VPS33B-205ENST00000556096 GOSR1O95249 250 aa12.04□□□□□ -0.48
VPS33B-205ENST00000556096 SEC11BP0C7V7 166 aa12.04□□□□□ -0.48
VPS33B-205ENST00000556096 SULT1A1P50225 295 aa12.04□□□□□ -0.48
VPS33B-205ENST00000556096 ERVFRD-1P60508 538 aa12.04□□□□□ -0.48
VPS33B-205ENST00000556096 ZNF833PQ6ZTB9 187 aa12.04□□□□□ -0.48
VPS33B-205ENST00000556096 HSD17B13Q7Z5P4 300 aaPredicted RBP12.04□□□□□ -0.48
VPS33B-205ENST00000556096 STX12Q86Y82 276 aa12.04□□□□□ -0.48
VPS33B-205ENST00000556096 EIF4E3Q8N5X7 224 aaKnown RBP12.04□□□□□ -0.48
VPS33B-205ENST00000556096 ZNF383Q8NA42 475 aa12.04□□□□□ -0.48
VPS33B-205ENST00000556096 SAT2Q96F10 170 aaPredicted RBP12.04□□□□□ -0.48
VPS33B-205ENST00000556096 RBKSQ9H477 322 aa12.04□□□□□ -0.48
VPS33B-205ENST00000556096 SULT1A2P50226 295 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 ERVK-16P61578 105 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 FAM71F2Q6NXP2 309 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 C11orf42Q8N5U0 333 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 OR8B3Q8NGG8 313 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 OR5C1Q8NGR4 320 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 C8orf46Q8TAG6 207 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 NEIL1Q96FI4 390 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-205ENST00000556096 OR8B2Q96RD0 313 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 CHODLQ9H9P2 273 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 CACFD1Q9UGQ2 172 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 A0A1W2PPH5 198 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 J3QR06 171 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 CST7O76096 145 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 CT45A6P0DMU7 189 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 CT45A5P0DMU8 189 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 CT45A7P0DMV0 189 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 IGHV1-8P0DP01 117 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 SPP1P10451 314 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 IAPPP10997 89 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 DYNLT3P51808 116 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 TAGLNQ01995 201 aaKnown RBP12.03□□□□□ -0.48
VPS33B-205ENST00000556096 AVPI1Q5T686 147 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 DHRS7BQ6IAN0 325 aaPredicted RBP12.03□□□□□ -0.48
VPS33B-205ENST00000556096 STPG2Q8N412 459 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 OR1S2Q8NGQ3 325 aa12.03□□□□□ -0.48
VPS33B-205ENST00000556096 CENPEQ02224 2701 aa12.02□□□□□ -0.48
VPS33B-205ENST00000556096 SETXQ7Z333 2677 aaKnown RBP12.02□□□□□ -0.49
VPS33B-205ENST00000556096 YLPM1P49750 1951 aaKnown RBP12.02□□□□□ -0.49
VPS33B-205ENST00000556096 PPIHO43447 177 aaKnown RBP12.02□□□□□ -0.49
VPS33B-205ENST00000556096 FBXO24O75426 580 aa12.02□□□□□ -0.49
VPS33B-205ENST00000556096 DFFBO76075 338 aa12.02□□□□□ -0.49
VPS33B-205ENST00000556096 LY86O95711 162 aa12.02□□□□□ -0.49
VPS33B-205ENST00000556096 RBP4P02753 201 aa12.02□□□□□ -0.49
VPS33B-205ENST00000556096 FGF2P09038 288 aa12.02□□□□□ -0.49
VPS33B-205ENST00000556096 OR9G9P0C7N8 305 aa12.02□□□□□ -0.49
VPS33B-205ENST00000556096 POU2AF1Q16633 256 aa12.02□□□□□ -0.49
VPS33B-205ENST00000556096 OR52E5Q8NH55 327 aa12.02□□□□□ -0.49
VPS33B-205ENST00000556096 OR9G1Q8NH87 305 aa12.02□□□□□ -0.49
VPS33B-205ENST00000556096 CIB3Q96Q77 187 aaPredicted RBP12.02□□□□□ -0.49
VPS33B-205ENST00000556096 SESN1Q9Y6P5 492 aa12.02□□□□□ -0.49
VPS33B-205ENST00000556096 CELSR2Q9HCU4 2923 aa12.01□□□□□ -0.49
VPS33B-205ENST00000556096 H3BP45 60 aa12.01□□□□□ -0.49
VPS33B-205ENST00000556096 LY6HO94772 140 aa12.01□□□□□ -0.49
VPS33B-205ENST00000556096 CRYZL1O95825 349 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms