RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 ZNF283Q8N7M2 679 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 CNEP1R1Q8N9A8 125 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 CLDND2Q8NHS1 167 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 RNASE11Q8TAA1 199 aaKnown RBP1.15□□□□□ -2.23
SCFD1-217ENST00000555953 OR52B2Q96RD2 323 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 TTTY12Q9BZ98 90 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 SLC2A9Q9NRM0 540 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 POLR1DQ9Y2S0 133 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 SCN9AQ15858 1988 aa1.15□□□□□ -2.23
SCFD1-217ENST00000555953 GBF1Q92538 1859 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 C11orf86A6NJI1 115 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 FNDC10F2Z333 226 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 PFDN6O15212 129 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 SLC16A4O15374 487 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 NPYP01303 97 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 TYMSP04818 313 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 REG1AP05451 166 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 MYL12AP19105 171 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 CD24P25063 80 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 RPL27AP46776 148 aaKnown RBP1.14□□□□□ -2.23
SCFD1-217ENST00000555953 GABRA2P47869 451 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 TAS2R30P59541 319 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 FKBP1AP62942 108 aaKnown RBP1.14□□□□□ -2.23
SCFD1-217ENST00000555953 ITGB3BPQ13352 177 aaPredicted RBP1.14□□□□□ -2.23
SCFD1-217ENST00000555953 LGALS9BQ3B8N2 356 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 GLT6D1Q7Z4J2 308 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 SLC51BQ86UW2 128 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 TMEM161BQ8NDZ6 487 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 PIGXQ8TBF5 258 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 RPS4Y2Q8TD47 263 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 MRPS24Q96EL2 167 aaKnown RBP1.14□□□□□ -2.23
SCFD1-217ENST00000555953 SLC35G5Q96KT7 338 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 TMEM109Q9BVC6 243 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 PECRQ9BY49 303 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 TMEM222Q9H0R3 208 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 FAM215AQ9Y5M1 114 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 COL11A1P12107 1806 aaPredicted RBP1.14□□□□□ -2.23
SCFD1-217ENST00000555953 C9orf84Q5VXU9 1444 aa1.14□□□□□ -2.23
SCFD1-217ENST00000555953 NCKAP5O14513 1909 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 ADCY9O60503 1353 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 KIF15Q9NS87 1388 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 DISC1C4P0D8 188 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 LRRN3E7EW58 273 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 H3BRN7 92 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 M0QZ92 97 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 CXCR6O00574 342 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 DEXIO95424 95 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 APOMO95445 188 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 HLA-DQB2P05538 268 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 UCHL1P09936 223 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 ZNF728P0DKX0 622 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 REG1BP48304 166 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 ZNF140P52738 457 aaPredicted RBP1.13□□□□□ -2.23
SCFD1-217ENST00000555953 BLVRAP53004 296 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 CTBP2P56545 445 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 RBM11P57052 281 aaKnown RBP1.13□□□□□ -2.23
SCFD1-217ENST00000555953 MAGOHP61326 146 aaKnown RBP1.13□□□□□ -2.23
SCFD1-217ENST00000555953 ZNF90Q03938 601 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 PPP1R1AQ13522 171 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 FAM78BQ5VT40 261 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 AGTRAPQ6RW13 159 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 C5orf46Q6UWT4 87 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 LRRN1Q6UXK5 716 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 LHFPL1Q86WI0 220 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 SLC35F6Q8N357 371 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 OR4X1Q8NH49 305 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 SMCR5Q8TEV8 140 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 DCANP1Q8TF63 244 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 FGF13Q92913 245 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 RNASE6Q93091 150 aaKnown RBP1.13□□□□□ -2.23
SCFD1-217ENST00000555953 TMA16Q96EY4 203 aaKnown RBP1.13□□□□□ -2.23
SCFD1-217ENST00000555953 CCL13Q99616 98 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 MAP1LC3AQ9H492 121 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 FGFR1OP2Q9NVK5 253 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 NDUFB11Q9NX14 153 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 DKKL1Q9UK85 242 aa1.13□□□□□ -2.23
SCFD1-217ENST00000555953 MDC1Q14676 2089 aaKnown RBP1.12□□□□□ -2.23
SCFD1-217ENST00000555953 DENND4BO75064 1496 aaPredicted RBP1.12□□□□□ -2.23
SCFD1-217ENST00000555953 GRIN2BQ13224 1484 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 ABCC12Q96J65 1359 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 A0A087WUU8 490 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 TRGV5A0A0B4J1U4 118 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 A0A1B0GW54 56 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 C21orf140B9A014 251 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 H0Y980 276 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 BHLHE40O14503 412 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 IL3P08700 152 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 IFI30P13284 250 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 ALOX5APP20292 161 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 RPL12P30050 165 aaKnown RBP1.12□□□□□ -2.23
SCFD1-217ENST00000555953 HINT1P49773 126 aaPredicted RBP1.12□□□□□ -2.23
SCFD1-217ENST00000555953 CDK9P50750 372 aaKnown RBP1.12□□□□□ -2.23
SCFD1-217ENST00000555953 AP2S1P53680 142 aaPredicted RBP1.12□□□□□ -2.23
SCFD1-217ENST00000555953 KRTAP12-1P59990 96 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 GNA12Q03113 381 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 JOSD1Q15040 202 aaPredicted RBP1.12□□□□□ -2.23
SCFD1-217ENST00000555953 BATFQ16520 125 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 PCOTHQ58A44 107 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 PABPC1L2AQ5JQF8 200 aa1.12□□□□□ -2.23
SCFD1-217ENST00000555953 SBSNQ6UWP8 590 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms