RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 PTPRZ1P23471 2315 aaPredicted RBP13.5□□□□□ -0.25
TUBB3-209ENST00000555609 TIMM8AO60220 97 aaPredicted RBP13.5□□□□□ -0.25
TUBB3-209ENST00000555609 GGCTO75223 188 aaKnown RBP13.5□□□□□ -0.25
TUBB3-209ENST00000555609 HPRT1P00492 218 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 CDC34P49427 236 aaPredicted RBP13.5□□□□□ -0.25
TUBB3-209ENST00000555609 SPCS3P61009 180 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 CR1LQ2VPA4 569 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 ASCL5Q7RTU5 278 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 FAM169BQ8N8A8 192 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 PPP1R35Q8TAP8 253 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 RPUSD4Q96CM3 377 aaKnown RBP13.5□□□□□ -0.25
TUBB3-209ENST00000555609 PACRGQ96M98 296 aaPredicted RBP13.5□□□□□ -0.25
TUBB3-209ENST00000555609 SSX3Q99909 188 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 CHODLQ9H9P2 273 aa13.5□□□□□ -0.25
TUBB3-209ENST00000555609 MARCH11A6NNE9 402 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 F6UZH7 168 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 C15orf65H3BRN8 121 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 WNT9BO14905 357 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 RBMXL2O75526 392 aaKnown RBP13.49□□□□□ -0.25
TUBB3-209ENST00000555609 GYPAP02724 150 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 GCH1P30793 250 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 KIR2DS2P43631 304 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 PKIAP61925 76 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 LCN2P80188 198 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 COL10A1Q03692 680 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 GFI1BQ5VTD9 330 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 KCNIP4Q6PIL6 250 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 VASH2Q86V25 355 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 CISD2Q8N5K1 135 aaKnown RBP13.49□□□□□ -0.25
TUBB3-209ENST00000555609 R3HDM4Q96D70 268 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 HIST1H2BLQ99880 126 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 PRDM13Q9H4Q3 707 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 JPT1Q9UK76 154 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 GAB2Q9UQC2 676 aa13.49□□□□□ -0.25
TUBB3-209ENST00000555609 C15orf62A8K5M9 175 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 AQP7O14520 342 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 CDX4O14627 284 aaPredicted RBP13.48□□□□□ -0.25
TUBB3-209ENST00000555609 TMPRSS2O15393 492 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 FABP4P15090 132 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 PDLIM4P50479 330 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 TMPRSS3P57727 454 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 DEFA6Q01524 100 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 TFF3Q07654 80 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 ZNF826PQ6ZT77 177 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 OR1P1Q8NH06 330 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 TMEM170AQ8WVE7 144 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 NCOR1P1Q9H4R4 102 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 KCNIP2Q9NS61 270 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 ZNF407Q9C0G0 2248 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 MED12LQ86YW9 2145 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 ITGB1BP1O14713 200 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 YPEL1O60688 119 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 PAGE4O60829 102 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 IGLV1-44P01699 117 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 CD1BP29016 333 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 HES3Q5TGS1 186 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 OR13A1Q8NGR1 328 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 OR2T10Q8NGZ9 312 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 ZDHHC16Q969W1 377 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 YPEL2Q96QA6 119 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 TRIB1Q96RU8 372 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 RAB9BQ9NP90 201 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 OR6C3Q9NZP0 311 aa13.48□□□□□ -0.25
TUBB3-209ENST00000555609 LINC00473A8K010 186 aa13.47□□□□□ -0.25
TUBB3-209ENST00000555609 DUTP33316 252 aaKnown RBP13.47□□□□□ -0.25
TUBB3-209ENST00000555609 CFHR2P36980 270 aa13.47□□□□□ -0.25
TUBB3-209ENST00000555609 OPRK1P41145 380 aa13.47□□□□□ -0.25
TUBB3-209ENST00000555609 GPR12P47775 334 aa13.47□□□□□ -0.25
TUBB3-209ENST00000555609 FOXF2Q12947 444 aa13.47□□□□□ -0.25
TUBB3-209ENST00000555609 JOSD1Q15040 202 aaPredicted RBP13.47□□□□□ -0.25
TUBB3-209ENST00000555609 Q3ZCU0 254 aa13.47□□□□□ -0.25
TUBB3-209ENST00000555609 BTNL3Q6UXE8 466 aa13.47□□□□□ -0.25
TUBB3-209ENST00000555609 Q6ZR03 302 aa13.47□□□□□ -0.25
TUBB3-209ENST00000555609 SNX22Q96L94 193 aa13.47□□□□□ -0.25
TUBB3-209ENST00000555609 PSG11Q9UQ72 335 aa13.47□□□□□ -0.25
TUBB3-209ENST00000555609 PIEZO1Q92508 2521 aa13.47□□□□□ -0.25
TUBB3-209ENST00000555609 SPEGQ15772 3267 aa13.47□□□□□ -0.25
TUBB3-209ENST00000555609 C11orf94C9JXX5 98 aa13.46□□□□□ -0.25
TUBB3-209ENST00000555609 TSTD3H0UI37 97 aa13.46□□□□□ -0.25
TUBB3-209ENST00000555609 PRDX2P32119 198 aa13.46□□□□□ -0.25
TUBB3-209ENST00000555609 KIR2DL2P43627 348 aaPredicted RBP13.46□□□□□ -0.25
TUBB3-209ENST00000555609 C4orf17Q53FE4 359 aa13.46□□□□□ -0.25
TUBB3-209ENST00000555609 PLSCR4Q9NRQ2 329 aa13.46□□□□□ -0.25
TUBB3-209ENST00000555609 ERVK-16P61578 105 aa13.46□□□□□ -0.26
TUBB3-209ENST00000555609 ACTL10Q5JWF8 245 aa13.46□□□□□ -0.26
TUBB3-209ENST00000555609 PRAMEF6Q5VXH4 476 aa13.46□□□□□ -0.26
TUBB3-209ENST00000555609 DHRS13Q6UX07 377 aa13.46□□□□□ -0.26
TUBB3-209ENST00000555609 CXorf67Q86X51 503 aaPredicted RBP13.46□□□□□ -0.26
TUBB3-209ENST00000555609 Q8N7P7 452 aa13.46□□□□□ -0.26
TUBB3-209ENST00000555609 OR4A16Q8NH70 328 aa13.46□□□□□ -0.26
TUBB3-209ENST00000555609 SARAFQ96BY9 339 aa13.46□□□□□ -0.26
TUBB3-209ENST00000555609 QTRT1Q9BXR0 403 aaKnown RBP13.46□□□□□ -0.26
TUBB3-209ENST00000555609 A0A1W2PPV4 95 aa13.45□□□□□ -0.26
TUBB3-209ENST00000555609 MGST3O14880 152 aa13.45□□□□□ -0.26
TUBB3-209ENST00000555609 ST8SIA5O15466 376 aa13.45□□□□□ -0.26
TUBB3-209ENST00000555609 GCGP01275 180 aa13.45□□□□□ -0.26
TUBB3-209ENST00000555609 CECR9P0C854 216 aa13.45□□□□□ -0.26
TUBB3-209ENST00000555609 SSTR5P35346 364 aa13.45□□□□□ -0.26
TUBB3-209ENST00000555609 PDZD11Q5EBL8 140 aa13.45□□□□□ -0.26
TUBB3-209ENST00000555609 IGFL2Q6UWQ7 119 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms