RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 HPCAP84074 193 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 FABP5Q01469 135 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 SMAGPQ0VAQ4 97 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 C1DQ13901 141 aaKnown RBP0.63□□□□□ -2.31
SCFD1-216ENST00000555550 COTL1Q14019 142 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 ANGPT1Q15389 498 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 IMPG1Q17R60 797 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 CLEC12BQ2HXU8 276 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 CD200R1LQ6Q8B3 271 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 SCGB1D4Q6XE38 83 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 FAM9CQ8IZT9 166 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 Q8N402 240 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 OR10A6Q8NH74 314 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 CLDND2Q8NHS1 167 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 SGMS2Q8NHU3 365 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 RNF133Q8WVZ7 376 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 PTH2Q96A98 100 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 CPNE2Q96FN4 548 aaPredicted RBP0.63□□□□□ -2.31
SCFD1-216ENST00000555550 C8orf76Q96K31 380 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 ARL5BQ96KC2 179 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 PRAP1Q96NZ9 151 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 MROQ9BYG7 248 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 NDEL1Q9GZM8 345 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 PARVAQ9NVD7 372 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 STRCQ7RTU9 1775 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 SNAPC4Q5SXM2 1469 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 SLX4Q8IY92 1834 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 TEX50A0A1B0GTY4 177 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 MDFIC2A0A1B0GVS7 189 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 ARL6IP5O75915 188 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 LY6HO94772 140 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 APOMO95445 188 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 IL6P05231 212 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 CD7P09564 240 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 UGT2B7P16662 529 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 ATF1P18846 271 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 NPPCP23582 126 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 CTBP2P56545 445 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 RBM11P57052 281 aaKnown RBP0.62□□□□□ -2.31
SCFD1-216ENST00000555550 RAB5BP61020 215 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 ERVS71-1P61550 626 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 DEFA6Q01524 100 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 GUK1Q16774 197 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 SAPCD1Q5SSQ6 148 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 SPATA12Q7Z6I5 190 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 SLC13A5Q86YT5 568 aaPredicted RBP0.62□□□□□ -2.31
SCFD1-216ENST00000555550 ZNF283Q8N7M2 679 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 ZNF565Q8N9K5 539 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 DDI1Q8WTU0 396 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 PPWD1Q96BP3 646 aaKnown RBP0.62□□□□□ -2.31
SCFD1-216ENST00000555550 TLCD1Q96CP7 247 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 SMIM12Q96EX1 92 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 UCK1Q9HA47 277 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 HHLA2Q9UM44 414 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 SCN9AQ15858 1988 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 HECW2Q9P2P5 1572 aa0.62□□□□□ -2.31
SCFD1-216ENST00000555550 A0A087WUU8 490 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.61□□□□□ -2.31
SCFD1-216ENST00000555550 A0A0A6YYH2 397 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 IGHV3-73A0A0B4J1V6 119 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 DHRS12A0PJE2 317 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 OR6C6A6NF89 314 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 A6NJ64 397 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 OR5K4A6NMS3 321 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 A8MUN3 132 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 C9JCJ5 164 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 H0Y980 276 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 LST1O00453 97 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 MRASO14807 208 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 LIN7AO14910 233 aaPredicted RBP0.61□□□□□ -2.31
SCFD1-216ENST00000555550 TGOLN2O43493 480 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 AHSA1O95433 338 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 LINC00614P0C842 121 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 ZNF728P0DKX0 622 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 ESDP10768 282 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 PVALBP20472 110 aaPredicted RBP0.61□□□□□ -2.31
SCFD1-216ENST00000555550 ALDH3A1P30838 453 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 RAP1GDS1P52306 607 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 NKX2-5P52952 324 aaPredicted RBP0.61□□□□□ -2.31
SCFD1-216ENST00000555550 LSM6P62312 80 aaKnown RBP0.61□□□□□ -2.31
SCFD1-216ENST00000555550 RANP62826 216 aaKnown RBP0.61□□□□□ -2.31
SCFD1-216ENST00000555550 FKBP1AP62942 108 aaKnown RBP0.61□□□□□ -2.31
SCFD1-216ENST00000555550 HLA-DRB3P79483 266 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 OR2F1Q13607 317 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 JOSD1Q15040 202 aaPredicted RBP0.61□□□□□ -2.31
SCFD1-216ENST00000555550 EBPQ15125 230 aaKnown RBP0.61□□□□□ -2.31
SCFD1-216ENST00000555550 LRRC75BQ2VPJ9 315 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.61□□□□□ -2.31
SCFD1-216ENST00000555550 TTC33Q6PID6 262 aaPredicted RBP0.61□□□□□ -2.31
SCFD1-216ENST00000555550 SBSNQ6UWP8 590 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 LRRN1Q6UXK5 716 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 C2orf91Q6ZV80 131 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 SLC35F6Q8N357 371 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 DEFB125Q8N687 156 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 FNDC9Q8TBE3 224 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 Q8WTZ3 238 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 CMTM5Q96DZ9 223 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 ABHD14BQ96IU4 210 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 MGLLQ99685 303 aa0.61□□□□□ -2.31
SCFD1-216ENST00000555550 DHRS9Q9BPW9 319 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms