RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 FLT4P35916 1363 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 ZNF462Q96JM2 2506 aa-0.1□□□□□ -2.42
SNX6-204ENST00000555541 SYNRGQ9UMZ2 1314 aa-0.1□□□□□ -2.42
SNX6-204ENST00000555541 EIF4G1Q04637 1599 aaKnown RBP-0.1□□□□□ -2.42
SNX6-204ENST00000555541 A0A0J9YW62 118 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 IBA57-AS1B1ANH7 110 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 SDCBPO00560 298 aaPredicted RBP-0.1□□□□□ -2.43
SNX6-204ENST00000555541 COCHO43405 550 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 ATP8B1O43520 1251 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 ARL6IP5O75915 188 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 ADORA1P30542 326 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 OR10J1P30954 320 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 CRATP43155 626 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 RPL28P46779 137 aaKnown RBP-0.1□□□□□ -2.43
SNX6-204ENST00000555541 RAB14P61106 215 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 HERVK_113P63121 156 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 RUNX1Q01196 453 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 MIAQ16674 131 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 BSXQ3C1V8 233 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 PDPK2PQ6A1A2 396 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 AHSA2Q719I0 299 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 LRRC34Q8IZ02 419 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 C1orf158Q8N1D5 194 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 C9orf163Q8N9P6 203 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 OR4C6Q8NH72 309 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 TNFAIP8L1Q8WVP5 186 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 ASB13Q8WXK3 278 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 AQP3Q92482 292 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 LRRC45Q96CN5 670 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 LINC00526Q96FQ7 95 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 GNB1LQ9BYB4 327 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 RPRD1BQ9NQG5 326 aaKnown RBP-0.1□□□□□ -2.43
SNX6-204ENST00000555541 RBM7Q9Y580 266 aaKnown RBP-0.1□□□□□ -2.43
SNX6-204ENST00000555541 GMEB1Q9Y692 573 aa-0.1□□□□□ -2.43
SNX6-204ENST00000555541 CHD5Q8TDI0 1954 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 A0A1W2PPM0 123 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 OR51F1A6NGY5 319 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 ASS1P00966 412 aaKnown RBP-0.11□□□□□ -2.43
SNX6-204ENST00000555541 HBZP02008 142 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 RNASE3P12724 160 aaKnown RBP-0.11□□□□□ -2.43
SNX6-204ENST00000555541 TBPL1P62380 186 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 FLOT2Q14254 428 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 VAMP3Q15836 100 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 OR10J3Q5JRS4 329 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 XKRXQ6PP77 449 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 LRRC6Q86X45 466 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 C1orf174Q8IYL3 243 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 RPP25LQ8N5L8 163 aaKnown RBP-0.11□□□□□ -2.43
SNX6-204ENST00000555541 ZNF321PQ8N8H1 164 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 OR2Y1Q8NGV0 311 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 TSKUQ8WUA8 353 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 ACOT12Q8WYK0 555 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 PPWD1Q96BP3 646 aaKnown RBP-0.11□□□□□ -2.43
SNX6-204ENST00000555541 HINT2Q9BX68 163 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 CHST6Q9GZX3 395 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 CD300AQ9UGN4 299 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 CLEC2DQ9UHP7 191 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 SNX24Q9Y343 169 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 SCAF11Q99590 1463 aaKnown RBP-0.11□□□□□ -2.43
SNX6-204ENST00000555541 PTPRSQ13332 1948 aa-0.11□□□□□ -2.43
SNX6-204ENST00000555541 KIF27Q86VH2 1401 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 A0A087WUU8 490 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 TMEM269A0A1B0GVZ9 245 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 C21orf140B9A014 251 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 GOLGA8RI6L899 631 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 OR2T1O43869 369 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 PMP2P02689 132 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 PTMSP20962 102 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 MSNP26038 577 aaKnown RBP-0.12□□□□□ -2.43
SNX6-204ENST00000555541 AGTR1P30556 359 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 ZNF93P35789 620 aaPredicted RBP-0.12□□□□□ -2.43
SNX6-204ENST00000555541 PSMD7P51665 324 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 TMEM33P57088 247 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 DAD1P61803 113 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 AKR1C1Q04828 323 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 SRSF6Q13247 344 aaKnown RBP-0.12□□□□□ -2.43
SNX6-204ENST00000555541 NKAIN1Q4KMZ8 207 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 MESTQ5EB52 335 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 FAM27BQ5VT28 67 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 MRPL52Q86TS9 123 aaKnown RBP-0.12□□□□□ -2.43
SNX6-204ENST00000555541 SPATA24Q86W54 205 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 RNASE6Q93091 150 aaKnown RBP-0.12□□□□□ -2.43
SNX6-204ENST00000555541 LRRC39Q96DD0 335 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 OR7D2Q96RA2 312 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 AMELYQ99218 206 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 EMC3Q9P0I2 261 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 KLK9Q9UKQ9 250 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 TONSLQ96HA7 1378 aa-0.12□□□□□ -2.43
SNX6-204ENST00000555541 CHD2O14647 1828 aaKnown RBP-0.13□□□□□ -2.43
SNX6-204ENST00000555541 MEGF8Q7Z7M0 2845 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 REREQ9P2R6 1566 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 LOC110117498A0A087WWA1 95 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 TRAV8-1A0A0A6YYK1 113 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 A0A1B0GW15 77 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 RAB19A4D1S5 217 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 GOLGA6L10A6NI86 522 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 CLDN25C9JDP6 229 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 COPEO14579 308 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 TFPTP0C1Z6 253 aa-0.13□□□□□ -2.43
SNX6-204ENST00000555541 KRTAP2-3P0C7H8 128 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms