RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CA5AP35218 305 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 OPRM1P35372 400 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 IFNGR2P38484 337 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 RPL27AP46776 148 aaKnown RBP0.3□□□□□ -2.36
SRP54-207ENST00000555535 GABRA2P47869 451 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 DLX6P56179 175 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 TMEM33P57088 247 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 TAS2R20P59543 309 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 CTAG1AP78358 180 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 PLCXD2Q0VAA5 305 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 DNAL1Q4LDG9 190 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 OR10K2Q6IF99 312 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 RASSF6Q6ZTQ3 369 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 BOD1L2Q8IYS8 172 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 ST13P4Q8IZP2 240 aaPredicted RBP0.3□□□□□ -2.36
SRP54-207ENST00000555535 BLIDQ8IZY5 108 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 OR1L8Q8NGR8 309 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 DYNC2LI1Q8TCX1 351 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 MSANTD3Q96H12 275 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 EIF5A2Q9GZV4 153 aaKnown RBP0.3□□□□□ -2.36
SRP54-207ENST00000555535 METTL9Q9H1A3 318 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 CFAP45Q9UL16 551 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.3□□□□□ -2.36
SRP54-207ENST00000555535 RBM7Q9Y580 266 aaKnown RBP0.3□□□□□ -2.36
SRP54-207ENST00000555535 TIMM9Q9Y5J7 89 aa0.3□□□□□ -2.36
SRP54-207ENST00000555535 KIF13BQ9NQT8 1826 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 GLI3P10071 1580 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 CACNA1BQ00975 2339 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 IGHV3-64A0A075B6Q5 118 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 LOC100506127A0A0U1RQW1 187 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 F5H5K5 113 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 GOLGA8RI6L899 631 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 COPEO14579 308 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 AZIN1O14977 448 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 CIAO1O76071 339 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 IGLV3-27P01718 113 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 RPSAP08865 295 aaKnown RBP0.29□□□□□ -2.36
SRP54-207ENST00000555535 UCHL1P09936 223 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 TRGC1P0CF51 173 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 SLC35E2BP0CK96 405 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 CXCL3P19876 107 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 CFL1P23528 166 aaKnown RBP0.29□□□□□ -2.36
SRP54-207ENST00000555535 RPL28P46779 137 aaKnown RBP0.29□□□□□ -2.36
SRP54-207ENST00000555535 TPI1P60174 286 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 BTN3A2P78410 334 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 HPCAP84074 193 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 GNA13Q14344 377 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 ZNHIT3Q15649 155 aaPredicted RBP0.29□□□□□ -2.36
SRP54-207ENST00000555535 USF2Q15853 346 aaPredicted RBP0.29□□□□□ -2.36
SRP54-207ENST00000555535 ARHGAP11BQ3KRB8 267 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 Q3ZCU0 254 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 LCN8Q6JVE9 175 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 UNQ6190/PRO20217Q6UXQ8 127 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 RPS19BP1Q86WX3 136 aaKnown RBP0.29□□□□□ -2.36
SRP54-207ENST00000555535 DYNAPQ8N1N2 210 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 ACBD4Q8NC06 268 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 OR2D3Q8NGH3 330 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 OR51H1Q8NH63 302 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 CLDND2Q8NHS1 167 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 ZNF675Q8TD23 568 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 Q8WTZ3 238 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 RAB2BQ8WUD1 216 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 MBD3L1Q8WWY6 194 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 CIDECQ96AQ7 238 aaPredicted RBP0.29□□□□□ -2.36
SRP54-207ENST00000555535 PPWD1Q96BP3 646 aaKnown RBP0.29□□□□□ -2.36
SRP54-207ENST00000555535 TESCQ96BS2 214 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 TLCD1Q96CP7 247 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 SMIM12Q96EX1 92 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 TMEM109Q9BVC6 243 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 MROQ9BYG7 248 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 REG4Q9BYZ8 158 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 METTL8Q9H825 291 aaKnown RBP0.29□□□□□ -2.36
SRP54-207ENST00000555535 ASCL3Q9NQ33 180 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 ZNHIT6Q9NWK9 470 aaKnown RBP0.29□□□□□ -2.36
SRP54-207ENST00000555535 EMC3Q9P0I2 261 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 FAM215AQ9Y5M1 114 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 CHD3Q12873 2000 aaKnown RBP0.29□□□□□ -2.36
SRP54-207ENST00000555535 KIAA0232Q92628 1395 aa0.29□□□□□ -2.36
SRP54-207ENST00000555535 TMED7-TICAM2A0A0A6YYA0 188 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 TRAV8-1A0A0A6YYK1 113 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 IGHV1-18A0A0C4DH31 117 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 A0A0D9SEW6 157 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 TMEM212A6NML5 194 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 H7C2G1 150 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 ATP8B1O43520 1251 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 CREBL2O60519 120 aaPredicted RBP0.28□□□□□ -2.36
SRP54-207ENST00000555535 NPYP01303 97 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 ATP5G1P05496 136 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 LGALS1P09382 135 aaKnown RBP0.28□□□□□ -2.36
SRP54-207ENST00000555535 TPM1P09493 284 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 TFPTP0C1Z6 253 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 CXCL2P19875 107 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 CRATP43155 626 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 REG1BP48304 166 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 CLDN12P56749 244 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 RBM11P57052 281 aaKnown RBP0.28□□□□□ -2.36
SRP54-207ENST00000555535 C1QTNF8P60827 252 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 DAD1P61803 113 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 AP1S1P61966 158 aa0.28□□□□□ -2.36
SRP54-207ENST00000555535 ELOBQ15370 118 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms