RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 CD300LFQ8TDQ1 290 aa20.05■□□□□ 0.8
TMEM260-207ENST00000555497 WFIKKN1Q96NZ8 548 aa20.05■□□□□ 0.8
TMEM260-207ENST00000555497 QTRT1Q9BXR0 403 aaKnown RBP20.05■□□□□ 0.8
TMEM260-207ENST00000555497 KIAA1456Q9P272 454 aa20.05■□□□□ 0.8
TMEM260-207ENST00000555497 C17orf100A8MU93 164 aa20.04■□□□□ 0.8
TMEM260-207ENST00000555497 DPPA3Q6W0C5 159 aa20.04■□□□□ 0.8
TMEM260-207ENST00000555497 HIPK2Q9H2X6 1198 aa20.04■□□□□ 0.8
TMEM260-207ENST00000555497 ZNF665Q9H7R5 613 aa20.04■□□□□ 0.8
TMEM260-207ENST00000555497 YLPM1P49750 1951 aaKnown RBP20.04■□□□□ 0.8
TMEM260-207ENST00000555497 UBE2L5PA0A1B0GUS4 154 aa20.04■□□□□ 0.8
TMEM260-207ENST00000555497 BTBD17A6NE02 478 aa20.04■□□□□ 0.8
TMEM260-207ENST00000555497 RBMXL2O75526 392 aaKnown RBP20.04■□□□□ 0.8
TMEM260-207ENST00000555497 PLA2G5P39877 138 aa20.04■□□□□ 0.8
TMEM260-207ENST00000555497 TLE4Q04727 773 aa20.04■□□□□ 0.8
TMEM260-207ENST00000555497 ZNF726P1Q15940 193 aa20.04■□□□□ 0.8
TMEM260-207ENST00000555497 TEX36Q5VZQ5 186 aa20.04■□□□□ 0.8
TMEM260-207ENST00000555497 SSX9Q7RTT3 188 aa20.04■□□□□ 0.8
TMEM260-207ENST00000555497 VKORC1L1Q8N0U8 176 aa20.04■□□□□ 0.8
TMEM260-207ENST00000555497 C12orf57Q99622 126 aa20.04■□□□□ 0.8
TMEM260-207ENST00000555497 PSMG3Q9BT73 122 aaPredicted RBP20.04■□□□□ 0.8
TMEM260-207ENST00000555497 MSRB2Q9Y3D2 182 aa20.04■□□□□ 0.8
TMEM260-207ENST00000555497 OR8U8P0C7N1 319 aa20.03■□□□□ 0.8
TMEM260-207ENST00000555497 OR2B8PP59922 312 aa20.03■□□□□ 0.8
TMEM260-207ENST00000555497 SSX7Q7RTT5 188 aa20.03■□□□□ 0.8
TMEM260-207ENST00000555497 RBMXL1Q96E39 390 aaKnown RBP20.03■□□□□ 0.8
TMEM260-207ENST00000555497 BIN3Q9NQY0 253 aa20.03■□□□□ 0.8
TMEM260-207ENST00000555497 MMP23AO75900 390 aa20.03■□□□□ 0.8
TMEM260-207ENST00000555497 HPRT1P00492 218 aa20.03■□□□□ 0.8
TMEM260-207ENST00000555497 FAM216AQ8WUB2 273 aa20.03■□□□□ 0.8
TMEM260-207ENST00000555497 TAF15Q92804 592 aaKnown RBP eCLIP20.03■□□□□ 0.8
TMEM260-207ENST00000555497 PARD6GQ9BYG4 376 aaPredicted RBP20.03■□□□□ 0.8
TMEM260-207ENST00000555497 PKDREJQ9NTG1 2253 aa20.02■□□□□ 0.8
TMEM260-207ENST00000555497 TRGV10A0A0A0MS01 117 aa20.02■□□□□ 0.8
TMEM260-207ENST00000555497 HNF4GQ14541 408 aa20.02■□□□□ 0.8
TMEM260-207ENST00000555497 DDB2Q92466 427 aa20.02■□□□□ 0.8
TMEM260-207ENST00000555497 C20orf24Q9BUV8 137 aa20.02■□□□□ 0.8
TMEM260-207ENST00000555497 TET2Q6N021 2002 aaPredicted RBP20.02■□□□□ 0.79
TMEM260-207ENST00000555497 IRF2P14316 349 aa20.02■□□□□ 0.79
TMEM260-207ENST00000555497 ICAM4Q14773 271 aa20.02■□□□□ 0.79
TMEM260-207ENST00000555497 AWAT1Q58HT5 328 aa20.02■□□□□ 0.79
TMEM260-207ENST00000555497 KALRNO60229 2985 aa20.02■□□□□ 0.79
TMEM260-207ENST00000555497 POLEQ07864 2286 aa20.01■□□□□ 0.79
TMEM260-207ENST00000555497 CEBPZOSA8MTT3 80 aa20.01■□□□□ 0.79
TMEM260-207ENST00000555497 FBP1P09467 338 aa20.01■□□□□ 0.79
TMEM260-207ENST00000555497 CLDND2Q8NHS1 167 aa20.01■□□□□ 0.79
TMEM260-207ENST00000555497 RND1Q92730 232 aa20.01■□□□□ 0.79
TMEM260-207ENST00000555497 SAA2-SAA4A0A096LPE2 208 aa20■□□□□ 0.79
TMEM260-207ENST00000555497 TRAV1-1A0A0B4J248 108 aa20■□□□□ 0.79
TMEM260-207ENST00000555497 ITGB1BP1O14713 200 aa20■□□□□ 0.79
TMEM260-207ENST00000555497 SAA2P0DJI9 122 aaPredicted RBP20■□□□□ 0.79
TMEM260-207ENST00000555497 ZNF439Q8NDP4 499 aa20■□□□□ 0.79
TMEM260-207ENST00000555497 ZNF251Q9BRH9 671 aa20■□□□□ 0.79
TMEM260-207ENST00000555497 TRAV3A0A0B4J244 114 aa20■□□□□ 0.79
TMEM260-207ENST00000555497 FCN3O75636 299 aa20■□□□□ 0.79
TMEM260-207ENST00000555497 SNRNP70P08621 437 aaKnown RBP20■□□□□ 0.79
TMEM260-207ENST00000555497 TNFRSF1AP19438 455 aa20■□□□□ 0.79
TMEM260-207ENST00000555497 S1PR3Q99500 378 aa20■□□□□ 0.79
TMEM260-207ENST00000555497 SMDT1Q9H4I9 107 aa20■□□□□ 0.79
TMEM260-207ENST00000555497 RPS10P5Q9NQ39 176 aa20■□□□□ 0.79
TMEM260-207ENST00000555497 GAB2Q9UQC2 676 aa20■□□□□ 0.79
TMEM260-207ENST00000555497 C7orf77A4D0Y5 90 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 RBFOX2O43251 390 aaKnown RBP eCLIP19.99■□□□□ 0.79
TMEM260-207ENST00000555497 SCAF4O95104 1147 aaKnown RBP19.99■□□□□ 0.79
TMEM260-207ENST00000555497 SRP19P09132 144 aaKnown RBP19.99■□□□□ 0.79
TMEM260-207ENST00000555497 ERVFRD-1P60508 538 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 S100A12P80511 92 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 AARDQ4LEZ3 155 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 NEUROG1Q92886 237 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 TMPRSS2O15393 492 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 EIF3GO75821 320 aaKnown RBP eCLIP19.99■□□□□ 0.79
TMEM260-207ENST00000555497 HBE1P02100 147 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 RAB7AP51149 207 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 ELLP55199 621 aaPredicted RBP19.99■□□□□ 0.79
TMEM260-207ENST00000555497 SERF2P84101 59 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 ZNF506Q5JVG8 444 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 PRAMEF5Q5TYX0 476 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 RXFP4Q8TDU9 374 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 RCC1LQ96I51 464 aaKnown RBP19.99■□□□□ 0.79
TMEM260-207ENST00000555497 CIB3Q96Q77 187 aaPredicted RBP19.99■□□□□ 0.79
TMEM260-207ENST00000555497 DIRC2Q96SL1 478 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 LINC00574Q9H8X3 128 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 IDI2-AS1Q9NZ38 188 aa19.99■□□□□ 0.79
TMEM260-207ENST00000555497 IGF2RP11717 2491 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 C15orf62A8K5M9 175 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 M0R036 132 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 DAOP14920 347 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 TLE1Q04724 770 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 SOHLH1Q5JUK2 328 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 LCN15Q6UWW0 184 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 CORO2AQ92828 525 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 CLCC1Q96S66 551 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 COLCA2A8K830 154 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 SHISA9B4DS77 424 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 IGKV1D-33P01593 117 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 IGKV1-33P01594 117 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 GNG10P50151 68 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 FGF8P55075 233 aaPredicted RBP19.98■□□□□ 0.79
TMEM260-207ENST00000555497 DMRTC2Q8IXT2 367 aaPredicted RBP19.98■□□□□ 0.79
TMEM260-207ENST00000555497 OR10P1Q8NGE3 313 aa19.98■□□□□ 0.79
TMEM260-207ENST00000555497 MBD3L1Q8WWY6 194 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms