RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 CREBL2O60519 120 aaPredicted RBP9.51□□□□□ -0.89
SRP54-206ENST00000555317 FCGR3BO75015 233 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 CA2P00918 260 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 PMP2P02689 132 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 IGKV1-13P0DP09 117 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 CD33P20138 364 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 SLC6A1P30531 599 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 CX3CL1P78423 397 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 SPCS2Q15005 226 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 TMEM177Q53S58 311 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 OR2B11Q5JQS5 317 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 TMEM17Q86X19 198 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 OR4S2Q8NH73 311 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 GRPEL2Q8TAA5 225 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 OSR1Q8TAX0 266 aaPredicted RBP9.51□□□□□ -0.89
SRP54-206ENST00000555317 ARPC1AQ92747 370 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 BORCS5Q969J3 196 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 TAS2R8Q9NYW2 309 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 CCDC59Q9P031 241 aaKnown RBP9.51□□□□□ -0.89
SRP54-206ENST00000555317 EXTL2Q9UBQ6 330 aa9.51□□□□□ -0.89
SRP54-206ENST00000555317 LINC00473A8K010 186 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 SULT1C2O00338 296 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 IGHG4P01861 327 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 RPLP1P05386 114 aaKnown RBP9.5□□□□□ -0.89
SRP54-206ENST00000555317 HLA-DMAP28067 261 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 CD40LGP29965 261 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 RCVRNP35243 200 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 HRH1P35367 487 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 KIR2DS2P43631 304 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 RFX2P48378 723 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 TSPAN5P62079 268 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 CATR1Q13166 79 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 MSMO1Q15800 293 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 ZNF562Q6V9R5 426 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 ZNF66Q6ZN08 573 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 PPP1R27Q86WC6 154 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 ZNF695Q8IW36 515 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 TCTEX1D1Q8N7M0 179 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 ZBTB34Q8NCN2 500 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 GPX8Q8TED1 209 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 GIMAP1Q8WWP7 306 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 ISOC1Q96CN7 298 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 ZNF2Q9BSG1 426 aaPredicted RBP9.5□□□□□ -0.89
SRP54-206ENST00000555317 TNCP24821 2201 aa9.5□□□□□ -0.89
SRP54-206ENST00000555317 A0A1W2PN81 502 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 G3V318 75 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 FCN1O00602 326 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 TNFSF12O43508 249 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 ACTL6BO94805 426 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 S100GP29377 79 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 CHRNA7P36544 502 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 NDPQ00604 133 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 CFHR3Q02985 330 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 DYRK1AQ13627 763 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 FXYD3Q14802 87 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 ACTBL2Q562R1 376 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 RNASE12Q5GAN4 147 aaKnown RBP9.49□□□□□ -0.89
SRP54-206ENST00000555317 UNQ5815/PRO19632Q6UWF5 114 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 C8orf86Q6ZUL3 223 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 OVCH2Q7RTZ1 564 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 POC5Q8NA72 575 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 DDB2Q92466 427 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 PHB2Q99623 299 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 C6orf62Q9GZU0 229 aaPredicted RBP9.49□□□□□ -0.89
SRP54-206ENST00000555317 CCL28Q9NRJ3 127 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 TPSG1Q9NRR2 321 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 ANAPC10Q9UM13 185 aa9.49□□□□□ -0.89
SRP54-206ENST00000555317 FOXA2Q9Y261 457 aaPredicted RBP9.49□□□□□ -0.89
SRP54-206ENST00000555317 H3BMQ9 156 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 TPPPO94811 219 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 IGLV2-23P01705 113 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 IFNA6P05013 189 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 NAT1P18440 290 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 RAB25P57735 213 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 UBE2KP61086 200 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 AADACL3Q5VUY0 350 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 PYHIN1Q6K0P9 492 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 LCNL1Q6ZST4 164 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 CMTM1Q8IZ96 169 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 MFSD4AQ8N468 514 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 TEX45Q8NA69 505 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 OR6F1Q8NGZ6 308 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 VSTM2AQ8TAG5 236 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 AIFM2Q9BRQ8 373 aa9.48□□□□□ -0.89
SRP54-206ENST00000555317 FAM103A1Q9BTL3 118 aaKnown RBP9.48□□□□□ -0.89
SRP54-206ENST00000555317 MPPED1O15442 326 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 HRASP01112 189 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 IGLV2-14P01704 120 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 PSMB8P28062 276 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 CDX1P47902 265 aaPredicted RBP9.47□□□□□ -0.89
SRP54-206ENST00000555317 CRIP2P52943 208 aaPredicted RBP9.47□□□□□ -0.89
SRP54-206ENST00000555317 RPL30P62888 115 aaKnown RBP9.47□□□□□ -0.89
SRP54-206ENST00000555317 TNXAQ16473 311 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 AKIRIN2Q53H80 203 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 DHRS11Q6UWP2 260 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 IDO2Q6ZQW0 420 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 ZNF818PQ6ZRF7 136 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 C1QL4Q86Z23 238 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 LAX1Q8IWV1 398 aa9.47□□□□□ -0.89
SRP54-206ENST00000555317 RNF152Q8N8N0 203 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms