RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 YIF1AO95070 293 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF35P13682 527 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 SPNP16150 400 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 CBR1P16152 277 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 IVDP26440 423 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 SSTR5P35346 364 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 RAB9AP51151 201 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 PPP1CBP62140 327 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 RPS23P62266 143 aaKnown RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 RPL38P63173 70 aaKnown RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 EMX1Q04741 257 aaPredicted RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 FMODQ06828 376 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 TNFRSF9Q07011 255 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 SKP2Q13309 424 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 C1DQ13901 141 aaKnown RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 IL18Q14116 193 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 SPA17Q15506 151 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 MAPK14Q16539 360 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 IMPG1Q17R60 797 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 TBC1D28Q2M2D7 210 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 SMUG1Q53HV7 270 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF684Q5T5D7 378 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 HHATQ5VTY9 493 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 Q5W150 140 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM53Q6P2H8 277 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF826PQ6ZT77 177 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 MBOAT2Q6ZWT7 520 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 MRPL55Q7Z7F7 128 aaKnown RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 WDR86Q86TI4 376 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 CALHM1Q8IU99 346 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 FAM216BQ8N7L0 139 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 CHST4Q8NCG5 386 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 FBXO36Q8NEA4 188 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 OR4X2Q8NGF9 303 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 PIFOQ8TCI5 191 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF675Q8TD23 568 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 KLF14Q8TD94 323 aaPredicted RBP0.89□□□□□ -2.27
PRPF39-208ENST00000554785 C15orf40Q8WUR7 153 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 APH1BQ8WW43 257 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ANKRD7Q92527 254 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ITFG2Q969R8 447 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 DDIT4LQ96D03 193 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 PPP1R36Q96LQ0 422 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 CAMK2N2Q96S95 79 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF382Q96SR6 550 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 C1orf50Q9BV19 199 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 TMED9Q9BVK6 235 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 TAPBPLQ9BX59 468 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ANKRD60Q9BZ19 345 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 RERGLQ9H628 205 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 AUNIPQ9H7T9 357 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 CCNB1IP1Q9NPC3 277 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 ADA2Q9NZK5 511 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 GUCA1BQ9UMX6 200 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 MUC2Q02817 5179 aa0.89□□□□□ -2.27
PRPF39-208ENST00000554785 DYNC2H1Q8NCM8 4307 aaKnown RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 FAT3Q8TDW7 4589 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 TMEM223A0PJW6 202 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 NCBP2LA6PVI3 153 aaKnown RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 H0YIV9 168 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 TEX46H3BTG2 121 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 H7C1C5 153 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 K7EMT4 169 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 MANBAO00462 879 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 CASQ2O14958 399 aaPredicted RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 IGF2P01344 180 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 SNRPAP09012 282 aaKnown RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 TPM1P09493 284 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ANXA8P13928 327 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 MUC1P15941 1255 aaPredicted RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 GSTM3P21266 225 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 CXCR1P25024 350 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 NPY1RP25929 384 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 APLNRP35414 380 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 LCN6P62502 163 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 HPCAP84074 193 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 DYNC1I2Q13409 638 aaKnown RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 KIR2DS1Q14954 304 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 PABPC1L2AQ5JQF8 200 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 CDKL4Q5MAI5 379 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 MRPL2Q5T653 305 aaKnown RBP0.88□□□□□ -2.27
PRPF39-208ENST00000554785 TPTE2P1Q5T6R2 138 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ANXA8L1Q5VT79 327 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 OR2T2Q6IF00 324 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF767PQ75MW2 155 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 GRINAQ7Z429 371 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 LRRC8AQ8IWT6 810 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 MICU2Q8IYU8 434 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 OFCC1Q8IZS5 231 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 DYNAPQ8N1N2 210 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 CBR4Q8N4T8 237 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 JAGN1Q8N5M9 183 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ZNF645Q8N7E2 425 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 ZIC4Q8N9L1 334 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 CDRT4Q8N9R6 151 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 OR4M1Q8NGD0 313 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 OR4K5Q8NGD3 323 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 OR6Q1Q8NGQ2 317 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 OR8U1Q8NH10 309 aa0.88□□□□□ -2.27
PRPF39-208ENST00000554785 STAG3L4Q8TBR4 150 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms