RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 FAM219AQ8IW50 185 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 SELENOHQ8IZQ5 122 aaKnown RBP11.61□□□□□ -0.55
SHOX2-206ENST00000554685 OSR1Q8TAX0 266 aaPredicted RBP11.61□□□□□ -0.55
SHOX2-206ENST00000554685 ASB13Q8WXK3 278 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 RRNAD1Q96FB5 475 aaKnown RBP11.61□□□□□ -0.55
SHOX2-206ENST00000554685 SPIN2AQ99865 258 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 SPIN2BQ9BPZ2 258 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 MGAT4CQ9UBM8 478 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 NUP50Q9UKX7 468 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 FAM96BQ9Y3D0 163 aa11.61□□□□□ -0.55
SHOX2-206ENST00000554685 CREBBPQ92793 2442 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 TIMM23O14925 209 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 S1PR2O95136 353 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 CRYZL1O95825 349 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 AVPP01185 164 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 FBP1P09467 338 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 FOSL1P15407 271 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 NQO2P16083 231 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 HLA-GP17693 338 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 HNF1AP20823 631 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 VDAC1P21796 283 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 AKR1C2P52895 323 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 HABP2Q14520 560 aaPredicted RBP11.6□□□□□ -0.55
SHOX2-206ENST00000554685 FCN2Q15485 313 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 SSX2Q16385 188 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 TMEM177Q53S58 311 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 KLF17Q5JT82 389 aaPredicted RBP11.6□□□□□ -0.55
SHOX2-206ENST00000554685 LDLRAD2Q5SZI1 272 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 RUSC1-AS1Q66K80 236 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 GSG1LQ6UXU4 331 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 SLC35G3Q8N808 338 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 OR4C13Q8NGP0 309 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 OR5M8Q8NGP6 311 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 LSM10Q969L4 123 aaKnown RBP11.6□□□□□ -0.55
SHOX2-206ENST00000554685 FLYWCH2Q96CP2 140 aaKnown RBP11.6□□□□□ -0.55
SHOX2-206ENST00000554685 RNF5Q99942 180 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 MS4A7Q9GZW8 240 aaPredicted RBP11.6□□□□□ -0.55
SHOX2-206ENST00000554685 PRR13Q9NZ81 148 aa11.6□□□□□ -0.55
SHOX2-206ENST00000554685 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.55
SHOX2-206ENST00000554685 MED13LQ71F56 2210 aa11.59□□□□□ -0.55
SHOX2-206ENST00000554685 CCDC168Q8NDH2 2452 aa11.59□□□□□ -0.55
SHOX2-206ENST00000554685 IGHV3OR16-10A0A075B7F0 116 aa11.59□□□□□ -0.55
SHOX2-206ENST00000554685 GOSR2O14653 212 aa11.59□□□□□ -0.55
SHOX2-206ENST00000554685 RAMP3O60896 148 aa11.59□□□□□ -0.55
SHOX2-206ENST00000554685 FSHBP01225 129 aa11.59□□□□□ -0.55
SHOX2-206ENST00000554685 HOXB5P09067 269 aa11.59□□□□□ -0.55
SHOX2-206ENST00000554685 BRWD1-AS2P59051 145 aa11.59□□□□□ -0.55
SHOX2-206ENST00000554685 LINC00205P59089 165 aa11.59□□□□□ -0.55
SHOX2-206ENST00000554685 THOC7Q6I9Y2 204 aaKnown RBP11.59□□□□□ -0.55
SHOX2-206ENST00000554685 BRD3OSQ6XYD6 125 aa11.59□□□□□ -0.55
SHOX2-206ENST00000554685 LHFPL5Q8TAF8 219 aa11.59□□□□□ -0.55
SHOX2-206ENST00000554685 R3HDM4Q96D70 268 aa11.59□□□□□ -0.55
SHOX2-206ENST00000554685 TMUB1Q9BVT8 246 aa11.59□□□□□ -0.55
SHOX2-206ENST00000554685 C5orf51A6NDU8 294 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 MARCH11A6NNE9 402 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 A8MV72 311 aaPredicted RBP11.58□□□□□ -0.56
SHOX2-206ENST00000554685 SHOXO15266 292 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 LGALS7P47929 136 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 CYCSP99999 105 aaKnown RBP11.58□□□□□ -0.56
SHOX2-206ENST00000554685 KRTAP1-1Q07627 177 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 SCGB2A2Q13296 93 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 POU2AF1Q16633 256 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 GGNBP1Q5YKI7 109 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 C9orf139Q6ZV77 190 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 LYZL2Q7Z4W2 148 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 THNSL2Q86YJ6 484 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 DMBX1Q8NFW5 382 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 VSTM2AQ8TAG5 236 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 CFHR4Q92496 578 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 HARBI1Q96MB7 349 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 TSNAXQ99598 290 aaKnown RBP11.58□□□□□ -0.56
SHOX2-206ENST00000554685 PDCD10Q9BUL8 212 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 MEGF9Q9H1U4 602 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 YAE1D1Q9NRH1 226 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 TMEM160Q9NX00 188 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 MMP24Q9Y5R2 645 aa11.58□□□□□ -0.56
SHOX2-206ENST00000554685 IGHV3-72A0A0B4J1Y9 119 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 FAM90A9PA6NNJ1 464 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 FAM25EA8MYX2 175 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 ADAP1O75689 374 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 VENTXO95231 258 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 MOSP00540 346 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 KRASP01116 189 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 IGKV1-39P01597 117 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 IGKV1D-39P04432 117 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 FAM106CPP0CH98 169 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 SLC25A6P12236 298 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 DYNLT3P51808 116 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 RPS16P62249 146 aaKnown RBP11.57□□□□□ -0.56
SHOX2-206ENST00000554685 AANATQ16613 207 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 VMA21Q3ZAQ7 101 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 H2BFWTQ7Z2G1 175 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 AKAP14Q86UN6 197 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 OR11H7Q8NGC8 314 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 OR2T10Q8NGZ9 312 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 AJUBAQ96IF1 538 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 SEC22AQ96IW7 307 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 RHOVQ96L33 236 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 CACFD1Q9UGQ2 172 aa11.57□□□□□ -0.56
SHOX2-206ENST00000554685 WNK2Q9Y3S1 2297 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms