RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 KIR2DL5BA0A0G2JN68 375 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 KIR2DL5BA0A0G2JPC4 375 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 C2orf70A6NJV1 201 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 H0YJW9 148 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 RAB29O14966 203 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 XRCC3O43542 346 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 GPX5O75715 221 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 ATP5HO75947 161 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 CDRT1O95170 752 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 GLAP06280 429 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 SAA2P0DJI9 122 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-229ENST00000554672 GTF2F2P13984 249 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 RCC1P18754 421 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-229ENST00000554672 PPP1CCP36873 323 aaKnown RBP3.56□□□□□ -1.84
ATXN3-229ENST00000554672 MAP2K4P45985 399 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 KRTAP10-6P60371 365 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-229ENST00000554672 ATP5G2Q06055 141 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 GPR176Q14439 515 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 FAM209BQ5JX69 171 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 ZNF57Q68EA5 555 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-229ENST00000554672 C12orf73Q69YU5 71 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 FAM131AQ6UXB0 335 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 KIR2DL5AQ8N109 375 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 GVQW1Q8N7I0 195 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 OR2AK2Q8NG84 335 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 KIR2DL5BQ8NHK3 375 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 GRPEL2Q8TAA5 225 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 C11orf45Q8TAV5 145 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 GALMQ96C23 342 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 PELI1Q96FA3 418 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 MYCBPQ99417 103 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-229ENST00000554672 FAM192AQ9GZU8 254 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 GABARAPL1Q9H0R8 117 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 RIBC2Q9H4K1 309 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 WASHC3Q9Y3C0 194 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 DYNC1H1Q14204 4646 aaKnown RBP3.56□□□□□ -1.84
ATXN3-229ENST00000554672 DNAH11Q96DT5 4516 aa3.56□□□□□ -1.84
ATXN3-229ENST00000554672 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.55□□□□□ -1.84
ATXN3-229ENST00000554672 TRAV25A0A0B4J276 109 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 DAPL1A0PJW8 107 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 J3QLW9 94 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 M0R129 80 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 LGALS9O00182 355 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 BMPR1BO00238 502 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 GYG2O15488 501 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 FKBP6O75344 327 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 MAS1P04201 325 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 ZNF19P17023 458 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 SERPINA2P20848 420 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 CBLN1P23435 193 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 ZNF93P35789 620 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-229ENST00000554672 DAPP51397 102 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 NANOS2P60321 138 aaKnown RBP3.55□□□□□ -1.84
ATXN3-229ENST00000554672 GNMTQ14749 295 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 TWIST1Q15672 202 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 ATP6AP1Q15904 470 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 DEFB135Q30KP9 77 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 SLC22A6Q4U2R8 563 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 SLC25A30Q5SVS4 291 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 LPCAT4Q643R3 524 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 KDM4DQ6B0I6 523 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 DMKNQ6E0U4 476 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-229ENST00000554672 RAB12Q6IQ22 244 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 GLDNQ6ZMI3 551 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-229ENST00000554672 GPHB5Q86YW7 130 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 SLC38A6Q8IZM9 456 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 OR51A2Q8NGJ7 313 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 OR8J1Q8NGP2 316 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 TSEN15Q8WW01 171 aaKnown RBP3.55□□□□□ -1.84
ATXN3-229ENST00000554672 MRPL48Q96GC5 212 aaKnown RBP3.55□□□□□ -1.84
ATXN3-229ENST00000554672 FYTTD1Q96QD9 318 aaKnown RBP3.55□□□□□ -1.84
ATXN3-229ENST00000554672 SULT4A1Q9BR01 284 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 THTPAQ9BU02 230 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 IFI27L2Q9H2X8 130 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 COA4Q9NYJ1 87 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 STEAP1Q9UHE8 339 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 APLNQ9ULZ1 77 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 PEX16Q9Y5Y5 336 aa3.55□□□□□ -1.84
ATXN3-229ENST00000554672 FAM90A7PA6NKC0 464 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 FAM223BA6NKX1 122 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 TMEM212A6NML5 194 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 FAM90A23PA8MXZ1 464 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 IGLL5B9A064 214 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 C11orf94C9JXX5 98 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 J3QRE1 110 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 ITGB1BP1O14713 200 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 GGCTO75223 188 aaKnown RBP3.54□□□□□ -1.84
ATXN3-229ENST00000554672 SC5DO75845 299 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 OR2C1O95371 312 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 CRYGBP07316 175 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 OR9G9P0C7N8 305 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 CTRB1P17538 263 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 FUT3P21217 361 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 CAPGP40121 348 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 RASSF2P50749 326 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 RHOGP84095 191 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 MRPL28Q13084 256 aaKnown RBP3.54□□□□□ -1.84
ATXN3-229ENST00000554672 RIPK1Q13546 671 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 RAB32Q13637 225 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 FLOT2Q14254 428 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms