RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 CREB3L1Q96BA8 519 aa11.16□□□□□ -0.62
SPTLC2-202ENST00000554365 RTBDNQ9BSG5 229 aaPredicted RBP11.16□□□□□ -0.62
SPTLC2-202ENST00000554365 SLC5A7Q9GZV3 580 aa11.16□□□□□ -0.62
SPTLC2-202ENST00000554365 OR2D2Q9H210 308 aa11.16□□□□□ -0.62
SPTLC2-202ENST00000554365 C5orf66Q9H5L9 145 aa11.16□□□□□ -0.62
SPTLC2-202ENST00000554365 HILPDAQ9Y5L2 63 aa11.16□□□□□ -0.62
SPTLC2-202ENST00000554365 NOTCH3Q9UM47 2321 aa11.16□□□□□ -0.62
SPTLC2-202ENST00000554365 LY6LH3BQJ8 138 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 K7EIL1 84 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 CTSDP07339 412 aaPredicted RBP11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 PGAM2P15259 253 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 PI3P19957 117 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 ZNF137PP52743 207 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 MSMO1Q15800 293 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 DEFB121Q5J5C9 76 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 C11orf87Q6NUJ2 197 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 SLC38A6Q8IZM9 456 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 DRAM1Q8N682 238 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 ZNF645Q8N7E2 425 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 WFDC9Q8NEX5 89 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 OR5AU1Q8NGC0 362 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 CHPT1Q8WUD6 406 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 ST6GALNAC6Q969X2 333 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 TMEM230Q96A57 120 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 C20orf85Q9H1P6 137 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 SDHAF2Q9NX18 166 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 COPZ2Q9P299 210 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 GAB2Q9UQC2 676 aa11.15□□□□□ -0.62
SPTLC2-202ENST00000554365 SAA2-SAA4A0A096LPE2 208 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 BUB1B-PAK6H3BSN5 160 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 HSD17B6O14756 317 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 ARPC1BO15143 372 aaKnown RBP11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 PF4P02776 101 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 SAA2P0DJI9 122 aaPredicted RBP11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 ECI1P42126 302 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 MECP2P51608 486 aaKnown RBP11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 DIAPH2-AS1Q14236 149 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 RPL39P5Q59GN2 51 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 ZNF833PQ6ZTB9 187 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 CENPSQ8N2Z9 138 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 ADAD2Q8NCV1 583 aaKnown RBP11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 BVESQ8NE79 360 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 GPHA2Q96T91 129 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 NUDT15Q9NV35 164 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 ZNF221Q9UK13 617 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 NUBP2Q9Y5Y2 271 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 RYR3Q15413 4870 aa11.14□□□□□ -0.63
SPTLC2-202ENST00000554365 TRAV6A0A075B6T7 132 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 GPR31O00270 319 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 TOR1AO14656 332 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 H2AFB2P0C5Z0 115 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 GPR12P47775 334 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 DYNLT3P51808 116 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 PRRX1P54821 245 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 LINC00205P59089 165 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 RND3P61587 244 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 CD83Q01151 205 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 PHLDA2Q53GA4 152 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 LPCAT3Q6P1A2 487 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 ZFAND1Q8TCF1 268 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 ZNF486Q96H40 463 aaPredicted RBP11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 AKR1E2Q96JD6 320 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 MARVELD1Q9BSK0 173 aa11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 RBM7Q9Y580 266 aaKnown RBP11.13□□□□□ -0.63
SPTLC2-202ENST00000554365 TCRBV4S1A1TA0A5B7 111 aa11.12□□□□□ -0.63
SPTLC2-202ENST00000554365 RAB29O14966 203 aa11.12□□□□□ -0.63
SPTLC2-202ENST00000554365 SLC22A5O76082 557 aa11.12□□□□□ -0.63
SPTLC2-202ENST00000554365 ANXA7P20073 488 aaKnown RBP11.12□□□□□ -0.63
SPTLC2-202ENST00000554365 RPL30P62888 115 aaKnown RBP11.12□□□□□ -0.63
SPTLC2-202ENST00000554365 DHODHQ02127 395 aa11.12□□□□□ -0.63
SPTLC2-202ENST00000554365 PLET1Q6UQ28 207 aa11.12□□□□□ -0.63
SPTLC2-202ENST00000554365 CENPVQ7Z7K6 275 aaPredicted RBP11.12□□□□□ -0.63
SPTLC2-202ENST00000554365 SLC25A42Q86VD7 318 aa11.12□□□□□ -0.63
SPTLC2-202ENST00000554365 ZBTB34Q8NCN2 500 aa11.12□□□□□ -0.63
SPTLC2-202ENST00000554365 OR10X1Q8NGY0 326 aa11.12□□□□□ -0.63
SPTLC2-202ENST00000554365 SCGB3A2Q96PL1 93 aa11.12□□□□□ -0.63
SPTLC2-202ENST00000554365 SLC2A9Q9NRM0 540 aa11.12□□□□□ -0.63
SPTLC2-202ENST00000554365 PIPOXQ9P0Z9 390 aa11.12□□□□□ -0.63
SPTLC2-202ENST00000554365 A0A0B4J293 547 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 WI2-2373I1.2A0A1W2PRP0 233 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 LINC00473A8K010 186 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 TNFSF12O43508 249 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 PGLYRP1O75594 196 aaPredicted RBP11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 RLN1P04808 185 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 HTR1DP28221 377 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 PIGPP57054 158 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 SUPT4H1P63272 117 aaKnown RBP11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 TRIM16LQ309B1 348 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 KHDC1LQ5JSQ8 128 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 TPTE2P1Q5T6R2 138 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 MINOS1Q5TGZ0 78 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 FAM71F2Q6NXP2 309 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 TMED4Q7Z7H5 227 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 MINDY2Q8NBR6 621 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 CAPSLQ8WWF8 208 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 RCC1LQ96I51 464 aaKnown RBP11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 MRPL20Q9BYC9 149 aaKnown RBP11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 GHITMQ9H3K2 345 aa11.11□□□□□ -0.63
SPTLC2-202ENST00000554365 C14orf166Q9Y224 244 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms