RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 SPANXB1Q9NS25 103 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-225ENST00000554214 MED29Q9NX70 200 aa3.57□□□□□ -1.84
ATXN3-225ENST00000554214 ZNF581Q9P0T4 197 aa3.57□□□□□ -1.84
ATXN3-225ENST00000554214 CLN8Q9UBY8 286 aa3.57□□□□□ -1.84
ATXN3-225ENST00000554214 SS18L2Q9UHA2 77 aa3.57□□□□□ -1.84
ATXN3-225ENST00000554214 VPREB3Q9UKI3 123 aa3.57□□□□□ -1.84
ATXN3-225ENST00000554214 MCTS1Q9ULC4 181 aaKnown RBP3.57□□□□□ -1.84
ATXN3-225ENST00000554214 PSG8Q9UQ74 426 aa3.57□□□□□ -1.84
ATXN3-225ENST00000554214 CSDC2Q9Y534 153 aaKnown RBP3.57□□□□□ -1.84
ATXN3-225ENST00000554214 OR1A2Q9Y585 309 aa3.57□□□□□ -1.84
ATXN3-225ENST00000554214 TIMM10BQ9Y5J6 103 aa3.57□□□□□ -1.84
ATXN3-225ENST00000554214 UNC13CQ8NB66 2214 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 A0A087WWC5 75 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 A0A0D9SEW6 157 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 IGHV5-10-1A0A0J9YXX1 117 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 KANTRA0A1W2PQU2 76 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 SNRPGP15A8MWD9 76 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 C21orf140B9A014 251 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 DEGS1O15121 323 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 P2RX6O15547 441 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 MLNRO43193 412 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 ERI3O43414 337 aaKnown RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 TIMM8AO60220 97 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 HSBP1O75506 76 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 OR2A4O95047 310 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 VENTXO95231 258 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 IGHG3P01860 377 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 HLA-AP01891 365 aaKnown RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 ALDOBP05062 364 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 C8orf88P0DMB2 117 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 HIST1H1EP10412 219 aaKnown RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 CTSEP14091 401 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 CD1DP15813 335 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 ADCYAP1P18509 176 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 CXCL2P19875 107 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 TCN2P20062 427 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 GADD45AP24522 165 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 ATP6V0CP27449 155 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 PSMB4P28070 264 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 CD1CP29017 333 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 FCGR2CP31995 323 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 TGFBR1P36897 503 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 ELK3P41970 407 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 RPS10P46783 165 aaKnown RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 GSK3BP49841 420 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 CNN1P51911 297 aaKnown RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 POLR2HP52434 150 aaKnown RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 PFN3P60673 137 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 PPIAP62937 165 aaKnown RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 ST3GAL3Q11203 375 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 OR2F1Q13607 317 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 ZNF345Q14585 488 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 GABRA6Q16445 453 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 BATFQ16520 125 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 ACKR1Q16570 336 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 COA6Q5JTJ3 125 aaKnown RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 UTF1Q5T230 341 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 BCL2L15Q5TBC7 163 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 WDR25Q64LD2 544 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 ZNF57Q68EA5 555 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 AGTRAPQ6RW13 159 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 EPGNQ6UW88 154 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 APOOLQ6UXV4 268 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 TSEN54Q7Z6J9 526 aaKnown RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 OR8I2Q8N0Y5 310 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 INO80EQ8NBZ0 244 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 PLPP5Q8NEB5 264 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 KLHL30-AS1Q8NEE0 82 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 OR1S2Q8NGQ3 325 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 VN1R17PQ8TDU5 208 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 GPR119Q8TDV5 335 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 ZNF418Q8TF45 676 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 SPRYD4Q8WW59 207 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 DCUN1D4Q92564 292 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 RAB8BQ92930 207 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 LHX4Q969G2 390 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 TMEM106AQ96A25 262 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 NABP1Q96AH0 204 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 FGGYQ96C11 551 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 OR2A7Q96R45 310 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 RAB40CQ96S21 281 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 BANF2Q9H503 90 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 CISHQ9NSE2 258 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 CLN6Q9NWW5 311 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 TAS2R8Q9NYW2 309 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 UQCR10Q9UDW1 63 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 ERG28Q9UKR5 140 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 GPR132Q9UNW8 380 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 MRPS16Q9Y3D3 137 aaKnown RBP3.56□□□□□ -1.84
ATXN3-225ENST00000554214 PPIAL4AQ9Y536 164 aa3.56□□□□□ -1.84
ATXN3-225ENST00000554214 MTORP42345 2549 aa3.55□□□□□ -1.84
ATXN3-225ENST00000554214 MED13LQ71F56 2210 aa3.55□□□□□ -1.84
ATXN3-225ENST00000554214 A0A087X0T9 212 aa3.55□□□□□ -1.84
ATXN3-225ENST00000554214 IGHV1-69-2A0A0G2JMI3 117 aa3.55□□□□□ -1.84
ATXN3-225ENST00000554214 KIR2DS1A0A191URI9 304 aa3.55□□□□□ -1.84
ATXN3-225ENST00000554214 LOC100130705A0A1B0GUX0 176 aa3.55□□□□□ -1.84
ATXN3-225ENST00000554214 A0A1W2PRS3 328 aa3.55□□□□□ -1.84
ATXN3-225ENST00000554214 C7orf77A4D0Y5 90 aa3.55□□□□□ -1.84
ATXN3-225ENST00000554214 TMEM189A5PLL7 270 aa3.55□□□□□ -1.84
ATXN3-225ENST00000554214 NAP1L6A6NFF2 107 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms