RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ZNF221Q9UK13 617 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 OAZ3Q9UMX2 235 aa6.64□□□□□ -1.35
PRKCH-208ENST00000553846 A0A1B0GW64 132 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 TEX22C9J3V5 150 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 CRTAPO75718 401 aaPredicted RBP6.63□□□□□ -1.35
PRKCH-208ENST00000553846 TUSC2O75896 110 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 APOA2P02652 100 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 ALPLP05186 524 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 FAM209BQ5JX69 171 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 C10orf55Q5SWW7 151 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 AWAT2Q6E213 333 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 RPL22L1Q6P5R6 122 aaKnown RBP6.63□□□□□ -1.35
PRKCH-208ENST00000553846 MOB1BQ7L9L4 216 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 C6orf201Q7Z4U5 140 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 AMIGO2Q86SJ2 522 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.63□□□□□ -1.35
PRKCH-208ENST00000553846 ZNF485Q8NCK3 441 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 OR1L6Q8NGR2 347 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 C11orf45Q8TAV5 145 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 FANCD2OSQ96PS1 177 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 SPAG8Q99932 426 aaPredicted RBP6.63□□□□□ -1.35
PRKCH-208ENST00000553846 FAAP24Q9BTP7 215 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 ABRACLQ9P1F3 81 aa6.63□□□□□ -1.35
PRKCH-208ENST00000553846 A0A0A6YYD4 124 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 FOXI3A8MTJ6 420 aaPredicted RBP6.62□□□□□ -1.35
PRKCH-208ENST00000553846 M0R1X1 148 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 TSPAN4O14817 238 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 XRCC3O43542 346 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 OR2J3O76001 311 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 HTR2CP28335 458 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 CEACAM6P40199 344 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 MFAP2P55001 183 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 UBE2KP61086 200 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 HLA-DRB3P79483 266 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 UNC119Q13432 240 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 IDO2Q6ZQW0 420 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 JAGN1Q8N5M9 183 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 OR2C3Q8N628 320 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 STPG3Q8N7X2 389 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 TEX45Q8NA69 505 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 THRSPQ92748 146 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 SLC7A6OSQ96CW6 309 aaPredicted RBP6.62□□□□□ -1.35
PRKCH-208ENST00000553846 HDHD3Q9BSH5 251 aaPredicted RBP6.62□□□□□ -1.35
PRKCH-208ENST00000553846 TM2D1Q9BX74 207 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 C5orf66Q9H5L9 145 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 ZNF430Q9H8G1 570 aaPredicted RBP6.62□□□□□ -1.35
PRKCH-208ENST00000553846 FBXL17Q9UF56 701 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 UBQLN2Q9UHD9 624 aa6.62□□□□□ -1.35
PRKCH-208ENST00000553846 FAT1Q14517 4588 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 CDK2AP2O75956 126 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 SCTP09683 121 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 GALP22466 123 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 ZBTB25P24278 435 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 ETV1P50549 477 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 RPS27AP62979 156 aaKnown RBP6.61□□□□□ -1.35
PRKCH-208ENST00000553846 QRFPP83859 136 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 TNXAQ16473 311 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 LINC01559Q495D7 138 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 Q499Y3 187 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 OR2G6Q5TZ20 316 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 OR10K2Q6IF99 312 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 Q6ZR54 194 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 CEACAM19Q7Z692 300 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 Q8NAQ8 132 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 RHOXF1Q8NHV9 184 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 APH1BQ8WW43 257 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 MARC2Q969Z3 335 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 ZNF414Q96IQ9 312 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 MYCBPQ99417 103 aaPredicted RBP6.61□□□□□ -1.35
PRKCH-208ENST00000553846 UQCC2Q9BRT2 126 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 NICN1Q9BSH3 213 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 HRH4Q9H3N8 390 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 AMBNQ9NP70 447 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 SDHAF2Q9NX18 166 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 ZNF257Q9Y2Q1 563 aa6.61□□□□□ -1.35
PRKCH-208ENST00000553846 EXOSC1Q9Y3B2 195 aaKnown RBP6.61□□□□□ -1.35
PRKCH-208ENST00000553846 NPIPB5A8MRT5 1133 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 IGLL5B9A064 214 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 E7EUB6 86 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 IGHV3-23P01764 117 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 IFNA4P05014 189 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 CD37P11049 281 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 RPL35AP18077 110 aaKnown RBP6.6□□□□□ -1.35
PRKCH-208ENST00000553846 PSMB6P28072 239 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 ARL3P36405 182 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 ELLP55199 621 aaPredicted RBP6.6□□□□□ -1.35
PRKCH-208ENST00000553846 CLEC19AQ6UXS0 136 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 ZNF645Q8N7E2 425 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 GALNT14Q96FL9 552 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 DERL3Q96Q80 235 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 PHB2Q99623 299 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 SLC29A1Q99808 456 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 SPIN2AQ99865 258 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 SPIN2BQ9BPZ2 258 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 ZNF436Q9C0F3 470 aaPredicted RBP6.6□□□□□ -1.35
PRKCH-208ENST00000553846 KCNK15Q9H427 330 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 Q9N2K0 584 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 FGF20Q9NP95 211 aaPredicted RBP6.6□□□□□ -1.35
PRKCH-208ENST00000553846 RDH8Q9NYR8 311 aa6.6□□□□□ -1.35
PRKCH-208ENST00000553846 GHRLQ9UBU3 117 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms