RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 FAM90A16PA6NEW6 464 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 FAM90A20PA6NIJ5 464 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 FAM90A8PA6NJQ4 464 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 FAM90A7PA6NKC0 464 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 FAM90A22PA8MWA6 464 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 FAM90A12PA8MX19 464 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 FAM90A5PA8MXJ8 464 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 FAM90A23PA8MXZ1 464 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 PRR33A8MZF0 331 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 H3BP45 60 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 IFNL4K9M1U5 179 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 TNFSF12O43508 249 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 FAM90A15PP0C7V4 464 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 FAM90A13PP0C7W8 464 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 FAM90A14PP0C7W9 464 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 FAM90A24PP0C7X0 464 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 SLC25A6P12236 298 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 HBG1P69891 147 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 HBG2P69892 147 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 PMP22Q01453 160 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 SRSF6Q13247 344 aaKnown RBP10.32□□□□□ -0.76
SHMT2-207ENST00000553837 BATFQ16520 125 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 TMEM95Q3KNT9 176 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 CST9LP1Q5W188 147 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 FAM180AQ6UWF9 173 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 ZNF525Q8N782 197 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 OR1K1Q8NGR3 316 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 BCL2L2Q92843 193 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-207ENST00000553837 HSPB7Q9UBY9 170 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 PXMP4Q9Y6I8 212 aa10.32□□□□□ -0.76
SHMT2-207ENST00000553837 URB1O60287 2271 aaKnown RBP10.32□□□□□ -0.76
SHMT2-207ENST00000553837 KLRC4-KLRK1H3BQV0 150 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 YPEL1O60688 119 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 RHBDL1O75783 438 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 CELA3BP08861 270 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 CD46P15529 392 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 ARF6P62330 175 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 VHLLQ6RSH7 139 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 Q6ZS49 121 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 MDP1Q86V88 176 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 MCEMP1Q8IX19 187 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 OR5A2Q8NGI9 324 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 OR1L6Q8NGR2 347 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 CMTM2Q8TAZ6 248 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 YPEL2Q96QA6 119 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 A0A0U1RQK1 487 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 ZNF320A2RRD8 509 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 H0Y980 276 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 TRAPPC2LH3BP13 241 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 TPPP2P59282 170 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 MED12LQ86YW9 2145 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 FER1L6-AS2Q96M78 137 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 VAMP8Q9BV40 100 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 MANBALQ9NQG1 85 aa10.31□□□□□ -0.76
SHMT2-207ENST00000553837 CFAP47Q6ZTR5 3102 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 LOC105371242A0A075B767 164 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 TRAV24A0A0B4J272 114 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 A0A1W2PR80 420 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 SLC22A20A6NK97 555 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 NUPR1O60356 82 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 CD99P14209 185 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 CA6P23280 308 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 IL3RAP26951 378 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 GCH1P30793 250 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 PLP2Q04941 152 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 TESK1Q15569 626 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 LHFPL4Q7Z7J7 247 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 OR4F5Q8NH21 305 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 GPR146Q96CH1 333 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 OR4F4Q96R69 305 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 WDR61Q9GZS3 305 aaKnown RBP10.3□□□□□ -0.76
SHMT2-207ENST00000553837 GP6Q9HCN6 339 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 PSENENQ9NZ42 101 aa10.3□□□□□ -0.76
SHMT2-207ENST00000553837 TTC28Q96AY4 2481 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 KIAA1324LA8MWY0 1029 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-207ENST00000553837 HS3ST1O14792 307 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 TUSC2O75896 110 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 S100GP29377 79 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 SRSF7Q16629 238 aaKnown RBP eCLIP10.29□□□□□ -0.76
SHMT2-207ENST00000553837 MORN2Q502X0 79 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 ZNF766Q5HY98 468 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 TPTE2P1Q5T6R2 138 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 FAM78BQ5VT40 261 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 PCSK4Q6UW60 755 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 WDR86Q86TI4 376 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 MKXQ8IYA7 352 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 ZNF295-AS1Q8N0V1 137 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 ZNF738Q8NE65 137 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 RDH5Q92781 318 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 RNF2Q99496 336 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 TMEM9BQ9NQ34 198 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 CCL28Q9NRJ3 127 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 TRGV5A0A0B4J1U4 118 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 IGHV2-70DA0A0C4DH43 119 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 SYNGR2O43760 224 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 NBEAP1P0C6P0 100 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 TFPI2P48307 235 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 FOXL1Q12952 345 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 TDRG1Q3Y452 100 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 PAM16Q9Y3D7 125 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms