RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 FAM231CP0DMU5 169 aa10.09□□□□□ -0.79
PRPF39-204ENST00000553605 ZBTB25P24278 435 aa10.09□□□□□ -0.79
PRPF39-204ENST00000553605 MED21Q13503 144 aa10.09□□□□□ -0.79
PRPF39-204ENST00000553605 ZDHHC13Q8IUH4 622 aa10.09□□□□□ -0.79
PRPF39-204ENST00000553605 CIB1Q99828 191 aa10.09□□□□□ -0.79
PRPF39-204ENST00000553605 C6orf62Q9GZU0 229 aaPredicted RBP10.09□□□□□ -0.79
PRPF39-204ENST00000553605 HRH4Q9H3N8 390 aa10.09□□□□□ -0.79
PRPF39-204ENST00000553605 OR1A1Q9P1Q5 309 aa10.09□□□□□ -0.79
PRPF39-204ENST00000553605 TRAV10A0A0B4J240 114 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 M0R1X1 148 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 TSPAN4O14817 238 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 IGFBP3P17936 291 aaPredicted RBP10.08□□□□□ -0.8
PRPF39-204ENST00000553605 ADMP35318 185 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 GTF2A1P52655 376 aaPredicted RBP10.08□□□□□ -0.8
PRPF39-204ENST00000553605 SNRPGP62308 76 aaKnown RBP10.08□□□□□ -0.8
PRPF39-204ENST00000553605 PRSS8Q16651 343 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 AWAT2Q6E213 333 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 UNQ9165/PRO28630Q6UXU0 137 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 SVOPQ8N4V2 548 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 SETD9Q8NE22 299 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 SETD6Q8TBK2 473 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 CD300LFQ8TDQ1 290 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 TRUB1Q8WWH5 349 aaKnown RBP10.08□□□□□ -0.8
PRPF39-204ENST00000553605 ACOT12Q8WYK0 555 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 PTX4Q96A99 478 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 CCDC140Q96MF4 163 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 SPIN2AQ99865 258 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 SPIN2BQ9BPZ2 258 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 FAAP24Q9BTP7 215 aa10.08□□□□□ -0.8
PRPF39-204ENST00000553605 SOHLH1Q5JUK2 328 aa10.07□□□□□ -0.8
PRPF39-204ENST00000553605 ZNF880Q6PDB4 577 aa10.07□□□□□ -0.8
PRPF39-204ENST00000553605 SLC25A42Q86VD7 318 aa10.07□□□□□ -0.8
PRPF39-204ENST00000553605 APRG1Q8IVJ8 170 aa10.07□□□□□ -0.8
PRPF39-204ENST00000553605 JAGN1Q8N5M9 183 aa10.07□□□□□ -0.8
PRPF39-204ENST00000553605 TEX45Q8NA69 505 aa10.07□□□□□ -0.8
PRPF39-204ENST00000553605 LGALS12Q96DT0 336 aa10.07□□□□□ -0.8
PRPF39-204ENST00000553605 RNF126Q9BV68 326 aa10.07□□□□□ -0.8
PRPF39-204ENST00000553605 RPL36Q9Y3U8 105 aaKnown RBP10.07□□□□□ -0.8
PRPF39-204ENST00000553605 S4R3C0 116 aa10.07□□□□□ -0.8
PRPF39-204ENST00000553605 DCTN3O75935 186 aa10.06□□□□□ -0.8
PRPF39-204ENST00000553605 HLA-DMBP28068 263 aa10.06□□□□□ -0.8
PRPF39-204ENST00000553605 CBX3Q13185 183 aa10.06□□□□□ -0.8
PRPF39-204ENST00000553605 VMA21Q3ZAQ7 101 aa10.06□□□□□ -0.8
PRPF39-204ENST00000553605 MEDAGQ5VYS4 303 aa10.06□□□□□ -0.8
PRPF39-204ENST00000553605 LAMTOR1Q6IAA8 161 aa10.06□□□□□ -0.8
PRPF39-204ENST00000553605 IDO2Q6ZQW0 420 aa10.06□□□□□ -0.8
PRPF39-204ENST00000553605 NEDD4LQ96PU5 975 aa10.06□□□□□ -0.8
PRPF39-204ENST00000553605 THTPAQ9BU02 230 aa10.06□□□□□ -0.8
PRPF39-204ENST00000553605 GABARAPL3Q9BY60 117 aa10.06□□□□□ -0.8
PRPF39-204ENST00000553605 GABARAPL1Q9H0R8 117 aa10.06□□□□□ -0.8
PRPF39-204ENST00000553605 CHMP1AQ9HD42 196 aaPredicted RBP10.06□□□□□ -0.8
PRPF39-204ENST00000553605 ARGLU1Q9NWB6 273 aaPredicted RBP10.06□□□□□ -0.8
PRPF39-204ENST00000553605 IMPAD1Q9NX62 359 aa10.06□□□□□ -0.8
PRPF39-204ENST00000553605 ERVK13-1Q9NX77 482 aa10.06□□□□□ -0.8
PRPF39-204ENST00000553605 ZNF257Q9Y2Q1 563 aa10.06□□□□□ -0.8
PRPF39-204ENST00000553605 TCRBV3S1A0A5B6 114 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 OR4C46A6NHA9 309 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 ACTL6BO94805 426 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 NAPSAO96009 420 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 GALP22466 123 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 ELLP55199 621 aaPredicted RBP10.05□□□□□ -0.8
PRPF39-204ENST00000553605 UBE2KP61086 200 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 FLOT2Q14254 428 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 Q6ZR54 194 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 Q6ZTC4 211 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 C6orf201Q7Z4U5 140 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.05□□□□□ -0.8
PRPF39-204ENST00000553605 EEF1AKMT3Q96AZ1 226 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 CKLFQ9UBR5 152 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 ARL2BPQ9Y2Y0 163 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 UFC1Q9Y3C8 167 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 LRP1BQ9NZR2 4599 aa10.05□□□□□ -0.8
PRPF39-204ENST00000553605 IGLV2-18A0A075B6J9 118 aa10.04□□□□□ -0.8
PRPF39-204ENST00000553605 TRAV8-7A0A075B6U6 113 aa10.04□□□□□ -0.8
PRPF39-204ENST00000553605 SNTNA6NMZ2 147 aa10.04□□□□□ -0.8
PRPF39-204ENST00000553605 CLEC3BP05452 202 aa10.04□□□□□ -0.8
PRPF39-204ENST00000553605 MYOD1P15172 320 aa10.04□□□□□ -0.8
PRPF39-204ENST00000553605 TAGLNQ01995 201 aaKnown RBP10.04□□□□□ -0.8
PRPF39-204ENST00000553605 TMEM187Q14656 261 aa10.04□□□□□ -0.8
PRPF39-204ENST00000553605 ZNF124Q15973 351 aa10.04□□□□□ -0.8
PRPF39-204ENST00000553605 RTL8BQ17RB0 113 aa10.04□□□□□ -0.8
PRPF39-204ENST00000553605 RPL22L1Q6P5R6 122 aaKnown RBP10.04□□□□□ -0.8
PRPF39-204ENST00000553605 C19orf35Q6ZS72 473 aa10.04□□□□□ -0.8
PRPF39-204ENST00000553605 MOB1BQ7L9L4 216 aa10.04□□□□□ -0.8
PRPF39-204ENST00000553605 CENPSQ8N2Z9 138 aa10.04□□□□□ -0.8
PRPF39-204ENST00000553605 ZNF430Q9H8G1 570 aaPredicted RBP10.04□□□□□ -0.8
PRPF39-204ENST00000553605 DMBT1Q9UGM3 2413 aaPredicted RBP10.04□□□□□ -0.8
PRPF39-204ENST00000553605 APOBP04114 4563 aaKnown RBP10.03□□□□□ -0.8
PRPF39-204ENST00000553605 HMX3A6NHT5 357 aa10.03□□□□□ -0.8
PRPF39-204ENST00000553605 DYNC1I1O14576 645 aa10.03□□□□□ -0.8
PRPF39-204ENST00000553605 AMBPP02760 352 aa10.03□□□□□ -0.8
PRPF39-204ENST00000553605 GSTT2P0CG29 244 aa10.03□□□□□ -0.8
PRPF39-204ENST00000553605 GSTT2BP0CG30 244 aa10.03□□□□□ -0.8
PRPF39-204ENST00000553605 CCDC58Q4VC31 144 aa10.03□□□□□ -0.8
PRPF39-204ENST00000553605 C10orf55Q5SWW7 151 aa10.03□□□□□ -0.8
PRPF39-204ENST00000553605 XAF1Q6GPH4 301 aa10.03□□□□□ -0.8
PRPF39-204ENST00000553605 CEACAM19Q7Z692 300 aa10.03□□□□□ -0.8
PRPF39-204ENST00000553605 CDH26Q8IXH8 852 aa10.03□□□□□ -0.8
PRPF39-204ENST00000553605 Q8NAQ8 132 aa10.03□□□□□ -0.8
PRPF39-204ENST00000553605 OR13C5Q8NGS8 318 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms