RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 PSENENQ9NZ42 101 aa4.96□□□□□ -1.62
VIPAS39-204ENST00000553576 PSG11Q9UQ72 335 aa4.96□□□□□ -1.62
VIPAS39-204ENST00000553576 LINC00312Q9Y6C7 94 aa4.96□□□□□ -1.62
VIPAS39-204ENST00000553576 BOD1L1Q8NFC6 3051 aa4.96□□□□□ -1.62
VIPAS39-204ENST00000553576 PPIAL4EA0A075B759 164 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 TRGV10A0A0A0MS01 117 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 IGHV3-43A0A0B4J1X8 118 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 hADV38S2A0JD32 116 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 PMS2P5A8MQ11 134 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 B9A039 149 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 FAM157AC9JC47 383 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 E7EQL1 145 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 PPIAL4DF5H284 164 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 H3BS24 57 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 CYB5R3P00387 301 aaPredicted RBP4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 APOC3P02656 99 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 IL6RP08887 468 aaPredicted RBP4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 PPIAL4FP0DN26 164 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 IGHV3-43DP0DP04 118 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 OMGP23515 440 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 CHRNB4P30926 498 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 CD80P33681 288 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 GPR12P47775 334 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 GNB2P62879 340 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 HBG1P69891 147 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 HBG2P69892 147 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 PMS2P11Q13670 270 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 PEA15Q15121 130 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 POU2AF1Q16633 256 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 LRRC75BQ2VPJ9 315 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 CT45A1Q5HYN5 189 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 FAM201AQ5SY85 155 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 FAM53AQ6NSI3 398 aaPredicted RBP4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 TCF23Q7RTU1 214 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 H2BFWTQ7Z2G1 175 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 SVBPQ8N300 66 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 LINC00311Q8N616 119 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 ZNF525Q8N782 197 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 C8orf31Q8N9H6 132 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 BOLLQ8N9W6 283 aaKnown RBP4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 OR2G3Q8NGZ4 309 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 CT45A3Q8NHU0 189 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 RNASE11Q8TAA1 199 aaKnown RBP4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 SUN5Q8TC36 379 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 TCTEX1D2Q8WW35 142 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 ZNF251Q9BRH9 671 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 IFI27L2Q9H2X8 130 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 RBKSQ9H477 322 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 C19orf12Q9NSK7 152 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 GNG12Q9UBI6 72 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 NDRG3Q9UGV2 375 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 RPUSD1Q9UJJ7 312 aaKnown RBP4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 PRELID3BQ9Y3B1 194 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 PPIAL4AQ9Y536 164 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 TIMM9Q9Y5J7 89 aa4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 ANKRD11Q6UB99 2663 aaPredicted RBP4.95□□□□□ -1.62
VIPAS39-204ENST00000553576 TRGV8A0A0C4DH27 118 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 NKX6-3A6NJ46 265 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 MARCH11A6NNE9 402 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 DEFB108AA8MXU0 73 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 NDUFS6O75380 124 aaKnown RBP4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 SCO1O75880 301 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 CST7O76096 145 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 S1PR2O95136 353 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 KRASP01116 189 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 IFNA5P01569 189 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 GYPAP02724 150 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 CD3EP07766 207 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 NQO2P16083 231 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 ADCYAP1P18509 176 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 MDKP21741 143 aaPredicted RBP4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 G6PCP35575 357 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 CAMLGP49069 296 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 THBS3P49746 956 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 EDDM3BP56851 147 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 SPCS3P61009 180 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 CCL8P80075 99 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 SRSF3P84103 164 aaKnown RBP4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 TLE1Q04724 770 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 ARL16Q0P5N6 197 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 ZNF816Q0VGE8 651 aaPredicted RBP4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 CLINT1Q14677 625 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 IZUMO4Q1ZYL8 232 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 VWC2Q2TAL6 325 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 SPSB3Q6PJ21 355 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 HEPN1Q6WQI6 88 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 SLC25A48Q6ZT89 311 aaKnown RBP4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 HAPLN4Q86UW8 402 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 ZNF429Q86V71 674 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 ZNF808Q8N4W9 903 aaPredicted RBP4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 HSD17B11Q8NBQ5 300 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 MBD3L1Q8WWY6 194 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 R3HDM4Q96D70 268 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 LRRC46Q96FV0 321 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 PLPPR2Q96GM1 343 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 S1PR3Q99500 378 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 CCL13Q99616 98 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 TMEM204Q9BSN7 226 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 ABHD14AQ9BUJ0 271 aa4.94□□□□□ -1.62
VIPAS39-204ENST00000553576 PRORYQ9H606 182 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms