RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 TMEM128Q5BJH2 165 aa7.84□□□□□ -1.15
TMEM260-204ENST00000553335 GLDNQ6ZMI3 551 aaPredicted RBP7.84□□□□□ -1.15
TMEM260-204ENST00000553335 TBC1D26Q86UD7 250 aa7.84□□□□□ -1.15
TMEM260-204ENST00000553335 DRAXINQ8NBI3 349 aaPredicted RBP7.84□□□□□ -1.15
TMEM260-204ENST00000553335 CD300LFQ8TDQ1 290 aa7.84□□□□□ -1.15
TMEM260-204ENST00000553335 CAPSLQ8WWF8 208 aa7.84□□□□□ -1.15
TMEM260-204ENST00000553335 CFHR4Q92496 578 aa7.84□□□□□ -1.15
TMEM260-204ENST00000553335 SSX3Q99909 188 aa7.84□□□□□ -1.15
TMEM260-204ENST00000553335 MRPL20Q9BYC9 149 aaKnown RBP7.84□□□□□ -1.15
TMEM260-204ENST00000553335 PRDM13Q9H4Q3 707 aa7.84□□□□□ -1.15
TMEM260-204ENST00000553335 SLC35D1Q9NTN3 355 aa7.84□□□□□ -1.15
TMEM260-204ENST00000553335 ZANQ9Y493 2812 aa7.84□□□□□ -1.15
TMEM260-204ENST00000553335 ZFHX3Q15911 3703 aa7.84□□□□□ -1.15
TMEM260-204ENST00000553335 hCG_2014768A0A024R1R8 64 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 TRAV6A0A075B6T7 132 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 C3orf85A0A1B0GTC6 90 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 MDFIC2A0A1B0GVS7 189 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 CRYM-AS1A6NIL9 109 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 LINC00473A8K010 186 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 VGLL3A8MV65 326 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 MPPED1O15442 326 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 FCGR3BO75015 233 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 CRLF1O75462 422 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 DHFRP00374 187 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 FAM106CPP0CH98 169 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 F2RP25116 425 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 PAX6P26367 422 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 UBE2MP61081 183 aaKnown RBP7.83□□□□□ -1.16
TMEM260-204ENST00000553335 RPL30P62888 115 aaKnown RBP7.83□□□□□ -1.16
TMEM260-204ENST00000553335 HES1Q14469 280 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 Q6YL49 198 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 SLC25A42Q86VD7 318 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 THNSL2Q86YJ6 484 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 PDPNQ86YL7 162 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 SPAG16Q8N0X2 631 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 ZNF383Q8NA42 475 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 ADAD2Q8NCV1 583 aaKnown RBP7.83□□□□□ -1.16
TMEM260-204ENST00000553335 OR5AN1Q8NGI8 311 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 OR2T10Q8NGZ9 312 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 OR51H1Q8NH63 302 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 OR5R1Q8NH85 324 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 ZNF418Q8TF45 676 aaPredicted RBP7.83□□□□□ -1.16
TMEM260-204ENST00000553335 DDB2Q92466 427 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 ZNF48Q96MX3 618 aaPredicted RBP7.83□□□□□ -1.16
TMEM260-204ENST00000553335 NAA60Q9H7X0 242 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 FAM212BQ9NTI7 297 aaPredicted RBP7.83□□□□□ -1.16
TMEM260-204ENST00000553335 NUDT15Q9NV35 164 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 PITPNC1Q9UKF7 332 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 FLVCR2Q9UPI3 526 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 WASHC3Q9Y3C0 194 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 SOX21Q9Y651 276 aaPredicted RBP7.83□□□□□ -1.16
TMEM260-204ENST00000553335 ACANP16112 2415 aa7.83□□□□□ -1.16
TMEM260-204ENST00000553335 SETD2Q9BYW2 2564 aaPredicted RBP7.83□□□□□ -1.16
TMEM260-204ENST00000553335 ANK3Q12955 4377 aaKnown RBP7.83□□□□□ -1.16
TMEM260-204ENST00000553335 IGHV3-72A0A0B4J1Y9 119 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 PIGBOS1A0A0B4J2F0 54 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 FAM90A9PA6NNJ1 464 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 INMT-MINDY4F8WBC2 141 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 H0Y980 276 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 H0YJW9 148 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 H3BUX3 64 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 RBFOX2O43251 390 aaKnown RBP eCLIP7.82□□□□□ -1.16
TMEM260-204ENST00000553335 VENTXO95231 258 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 HPRT1P00492 218 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 MOSP00540 346 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 IGKV1D-33P01593 117 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 IGKV1-33P01594 117 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 SNRNP70P08621 437 aaKnown RBP7.82□□□□□ -1.16
TMEM260-204ENST00000553335 FAM157CP0CG43 387 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 IER3P46695 156 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 RAG2P55895 527 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 LINC00205P59089 165 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 DHODHQ02127 395 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 EBI3Q14213 229 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 OR2B11Q5JQS5 317 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 DHRS7BQ6IAN0 325 aaPredicted RBP7.82□□□□□ -1.16
TMEM260-204ENST00000553335 CCBE1Q6UXH8 406 aaPredicted RBP7.82□□□□□ -1.16
TMEM260-204ENST00000553335 SIGLECL1Q8N7X8 197 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 MINDY2Q8NBR6 621 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 OR4C13Q8NGP0 309 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 OR4S2Q8NH73 311 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 SSMEM1Q8WWF3 244 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 TMEM230Q96A57 120 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 FLYWCH2Q96CP2 140 aaKnown RBP7.82□□□□□ -1.16
TMEM260-204ENST00000553335 JMJD8Q96S16 334 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 GPHA2Q96T91 129 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 RNF5Q99942 180 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 AIFM2Q9BRQ8 373 aa7.82□□□□□ -1.16
TMEM260-204ENST00000553335 SSBP4Q9BWG4 385 aaPredicted RBP7.82□□□□□ -1.16
TMEM260-204ENST00000553335 ALX4Q9H161 411 aaPredicted RBP7.82□□□□□ -1.16
TMEM260-204ENST00000553335 HOXA3O43365 443 aaPredicted RBP7.81□□□□□ -1.16
TMEM260-204ENST00000553335 PRAF2O60831 178 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 PEX14O75381 377 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 ATG12O94817 140 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 IFNA2P01563 188 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 SERPINE2P07093 398 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 OR4E1P0C645 316 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 RPA2P15927 270 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 TMEM11P17152 192 aa7.81□□□□□ -1.16
TMEM260-204ENST00000553335 ANXA7P20073 488 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms