RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 FXYD3Q14802 87 aa11.99□□□□□ -0.49
SHMT2-204ENST00000553324 CDK10Q15131 360 aa11.99□□□□□ -0.49
SHMT2-204ENST00000553324 BEAN1Q3B7T3 259 aa11.99□□□□□ -0.49
SHMT2-204ENST00000553324 VMA21Q3ZAQ7 101 aa11.99□□□□□ -0.49
SHMT2-204ENST00000553324 PDLIM3Q53GG5 364 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-204ENST00000553324 OXLD1Q5BKU9 147 aa11.99□□□□□ -0.49
SHMT2-204ENST00000553324 ZNF66Q6ZN08 573 aa11.99□□□□□ -0.49
SHMT2-204ENST00000553324 REC114Q7Z4M0 266 aa11.99□□□□□ -0.49
SHMT2-204ENST00000553324 MRPL41Q8IXM3 137 aaKnown RBP11.99□□□□□ -0.49
SHMT2-204ENST00000553324 LINC00482Q8N8I6 264 aa11.99□□□□□ -0.49
SHMT2-204ENST00000553324 OR5M8Q8NGP6 311 aa11.99□□□□□ -0.49
SHMT2-204ENST00000553324 C4orf3Q8WVX3 66 aa11.99□□□□□ -0.49
SHMT2-204ENST00000553324 BORCS5Q969J3 196 aa11.99□□□□□ -0.49
SHMT2-204ENST00000553324 C5orf30Q96GV9 206 aa11.99□□□□□ -0.49
SHMT2-204ENST00000553324 DCUN1D5Q9BTE7 237 aa11.99□□□□□ -0.49
SHMT2-204ENST00000553324 FOXA2Q9Y261 457 aaPredicted RBP11.99□□□□□ -0.49
SHMT2-204ENST00000553324 VSIG4Q9Y279 399 aa11.99□□□□□ -0.49
SHMT2-204ENST00000553324 A0A1W2PN81 502 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 CREBL2O60519 120 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-204ENST00000553324 CRYZL1O95825 349 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 PPYP01298 95 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 IGLV2-23P01705 113 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 CRYGBP07316 175 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 EGR2P11161 476 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-204ENST00000553324 CHRNA7P36544 502 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 TAS2R46P59540 309 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 UBE2KP61086 200 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 NDPQ00604 133 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 ECSCRQ19T08 205 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 ACTBL2Q562R1 376 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 DHRS11Q6UWP2 260 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 LCNL1Q6ZST4 164 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 KCTD9Q7L273 389 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 OVCH2Q7RTZ1 564 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 MYOZ3Q8TDC0 251 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 ARPC1AQ92747 370 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 P2RX4Q99571 388 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 AIFM2Q9BRQ8 373 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 SCPEP1Q9HB40 452 aa11.98□□□□□ -0.49
SHMT2-204ENST00000553324 IGKV1D-13A0A0B4J2D9 117 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 SRRM4A7MD48 611 aaKnown RBP11.97□□□□□ -0.49
SHMT2-204ENST00000553324 WIPF1O43516 503 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 FCGR3BO75015 233 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 TPPPO94811 219 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 IGLV2-14P01704 120 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 EIF4EP06730 217 aaKnown RBP11.97□□□□□ -0.49
SHMT2-204ENST00000553324 IGKV1-13P0DP09 117 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 PTHLHP12272 177 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 IGLL1P15814 213 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 NAT1P18440 290 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 AADACP22760 399 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 KIR2DS2P43631 304 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 C19orf54Q5BKX5 351 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 UNQ5815/PRO19632Q6UWF5 114 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 ETV3LQ6ZN32 361 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 C18orf65Q6ZTR6 163 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 MFSD4AQ8N468 514 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 ZNF491Q8N8L2 437 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 LFNGQ8NES3 379 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 C15orf40Q8WUR7 153 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 SECTM1Q8WVN6 248 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 SNAPC3Q92966 411 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 NAA50Q9GZZ1 169 aaKnown RBP11.97□□□□□ -0.49
SHMT2-204ENST00000553324 KLK15Q9H2R5 256 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 SLA2Q9H6Q3 261 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 ZMAT5Q9UDW3 170 aaKnown RBP11.97□□□□□ -0.49
SHMT2-204ENST00000553324 ANAPC10Q9UM13 185 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 A3GALT2U3KPV4 340 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 NOTCH1P46531 2555 aa11.97□□□□□ -0.49
SHMT2-204ENST00000553324 MEIS3P1A6NDR6 274 aa11.96□□□□□ -0.49
SHMT2-204ENST00000553324 SULT1C2O00338 296 aa11.96□□□□□ -0.49
SHMT2-204ENST00000553324 GNB1P62873 340 aa11.96□□□□□ -0.49
SHMT2-204ENST00000553324 RUNX1Q01196 453 aa11.96□□□□□ -0.49
SHMT2-204ENST00000553324 OR5H2Q8NGV7 314 aa11.96□□□□□ -0.49
SHMT2-204ENST00000553324 OR4S2Q8NH73 311 aa11.96□□□□□ -0.49
SHMT2-204ENST00000553324 VSTM2AQ8TAG5 236 aa11.96□□□□□ -0.49
SHMT2-204ENST00000553324 TCTEX1D2Q8WW35 142 aa11.96□□□□□ -0.49
SHMT2-204ENST00000553324 RAX2Q96IS3 184 aa11.96□□□□□ -0.49
SHMT2-204ENST00000553324 BCL7BQ9BQE9 202 aa11.96□□□□□ -0.49
SHMT2-204ENST00000553324 SLC5A7Q9GZV3 580 aa11.96□□□□□ -0.49
SHMT2-204ENST00000553324 EHFQ9NZC4 300 aa11.96□□□□□ -0.49
SHMT2-204ENST00000553324 FBXO7Q9Y3I1 522 aa11.96□□□□□ -0.49
SHMT2-204ENST00000553324 NOTCH3Q9UM47 2321 aa11.95□□□□□ -0.5
SHMT2-204ENST00000553324 FAM25AB3EWG3 89 aa11.95□□□□□ -0.5
SHMT2-204ENST00000553324 FAM25CB3EWG5 89 aa11.95□□□□□ -0.5
SHMT2-204ENST00000553324 FAM25GB3EWG6 89 aa11.95□□□□□ -0.5
SHMT2-204ENST00000553324 H3BUA1 57 aa11.95□□□□□ -0.5
SHMT2-204ENST00000553324 HPGDSO60760 199 aa11.95□□□□□ -0.5
SHMT2-204ENST00000553324 ACTL6BO94805 426 aa11.95□□□□□ -0.5
SHMT2-204ENST00000553324 FCER2P06734 321 aa11.95□□□□□ -0.5
SHMT2-204ENST00000553324 ELK1P19419 428 aa11.95□□□□□ -0.5
SHMT2-204ENST00000553324 RPL5P46777 297 aaKnown RBP11.95□□□□□ -0.5
SHMT2-204ENST00000553324 TMBIM6P55061 237 aa11.95□□□□□ -0.5
SHMT2-204ENST00000553324 HERV-K104P61576 105 aa11.95□□□□□ -0.5
SHMT2-204ENST00000553324 EIF4EBP1Q13541 118 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-204ENST00000553324 DYRK1AQ13627 763 aa11.95□□□□□ -0.5
SHMT2-204ENST00000553324 KIAA0141Q14154 515 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-204ENST00000553324 OR6F1Q8NGZ6 308 aa11.95□□□□□ -0.5
SHMT2-204ENST00000553324 GRPEL2Q8TAA5 225 aa11.95□□□□□ -0.5
SHMT2-204ENST00000553324 GPX8Q8TED1 209 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms