RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 BORCS8Q96FH0 119 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 GRAMD2BQ96HH9 432 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 ATG101Q9BSB4 218 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 NDUFAF3Q9BU61 184 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 TSSK6Q9BXA6 273 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 MROQ9BYG7 248 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 CCDC90BQ9GZT6 254 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 WFDC10AQ9H1F0 79 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 ZC4H2Q9NQZ6 224 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 PLCXD1Q9NUJ7 323 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 IL20Q9NYY1 176 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 PTTG2Q9NZH5 202 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 UBQLN2Q9UHD9 624 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 LAMP5Q9UJQ1 280 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 BAIAP2Q9UQB8 552 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 GSTK1Q9Y2Q3 226 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 KLHDC2Q9Y2U9 406 aa3.8□□□□□ -1.8
CKAP4-203ENST00000553039 TRAV25A0A0B4J276 109 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 A0A1W2PPE3 182 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 EFCAB10A6NFE3 127 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 CCDC160A6NGH7 325 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 DHRS7CA6NNS2 312 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 RIIAD1A6NNX1 92 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 F8WDY8 70 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 M0R129 80 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 SPINT2O43291 252 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 PRKYO43930 277 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 SSX5O60225 188 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 ENTPD6O75354 484 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 ZNF254O75437 659 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 GATBO75879 557 aaKnown RBP3.79□□□□□ -1.8
CKAP4-203ENST00000553039 FOLR2P14207 255 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 ZNF3P17036 446 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 SPI1P17947 270 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 GLP1RP43220 463 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 ALDH3B2P48448 385 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 CMC4P56277 68 aaPredicted RBP3.79□□□□□ -1.8
CKAP4-203ENST00000553039 UBE2V1Q13404 147 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 PLGLAQ15195 96 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 NEDD8Q15843 81 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 SLC25A30Q5SVS4 291 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 UTF1Q5T230 341 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 LAIR2Q6ISS4 152 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 ZNF343Q6P1L6 599 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 ZNF562Q6V9R5 426 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 ZNF367Q7RTV3 350 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 PRSS48Q7RTY5 328 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 GPR141Q7Z602 305 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 NRARPQ7Z6K4 114 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 GID4Q8IVV7 300 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 UBE2DNLQ8IWF7 75 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 STX19Q8N4C7 294 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 TCEANCQ8N8B7 351 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 SLC37A3Q8NCC5 494 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 LFNGQ8NES3 379 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 SLC24A4Q8NFF2 622 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 OR8D4Q8NGM9 314 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 OR11H2Q8NH07 326 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 ZNRF4Q8WWF5 429 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 IL4I1Q96RQ9 567 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 TEAD3Q99594 435 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 MLST8Q9BVC4 326 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 PBOV1Q9GZY1 135 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 CSTL1Q9H114 145 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 C11orf68Q9H3H3 251 aaKnown RBP3.79□□□□□ -1.8
CKAP4-203ENST00000553039 DUSP21Q9H596 190 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 HMG20AQ9NP66 347 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 RAB9BQ9NP90 201 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 PAK1IP1Q9NWT1 392 aaPredicted RBP3.79□□□□□ -1.8
CKAP4-203ENST00000553039 TVP23BQ9NYZ1 205 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 PSORS1C1Q9UIG5 152 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 RPL36Q9Y3U8 105 aaKnown RBP3.79□□□□□ -1.8
CKAP4-203ENST00000553039 AGRNO00468 2067 aa3.79□□□□□ -1.8
CKAP4-203ENST00000553039 GAGE12JA6NER3 117 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 MPTX1A8MV57 137 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 ZNF701M0R085 212 aaPredicted RBP3.78□□□□□ -1.8
CKAP4-203ENST00000553039 MYL12BO14950 172 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 CTDSPLO15194 276 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 DIRAS3O95661 229 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 FADS2O95864 444 aaKnown RBP3.78□□□□□ -1.8
CKAP4-203ENST00000553039 MT-ND2P03891 347 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 GYPBP06028 91 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 CDK1P06493 297 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 HTR1AP08908 422 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 DBTP11182 482 aaKnown RBP3.78□□□□□ -1.8
CKAP4-203ENST00000553039 PSKH1P11801 424 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 MYL12AP19105 171 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 LGALS7P47929 136 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 KCNJ3P48549 501 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 RBP2P50120 134 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 MTCP1P56278 107 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 LINC00205P59089 165 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 ST3GAL4Q11206 333 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 FOXI1Q12951 378 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 ZNF829Q3KNS6 432 aaPredicted RBP3.78□□□□□ -1.8
CKAP4-203ENST00000553039 RNF212Q495C1 297 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 PIK3CD-AS1Q5SR53 167 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 NXNL2Q5VZ03 156 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 XAF1Q6GPH4 301 aa3.78□□□□□ -1.8
CKAP4-203ENST00000553039 SLC25A48Q6ZT89 311 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms