RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 CITED1Q99966 193 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 ZNF2Q9BSG1 426 aaPredicted RBP8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 DCUN1D5Q9BTE7 237 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 ZFP57Q9NU63 452 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 CACFD1Q9UGQ2 172 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 IGKV1D-8A0A087WSZ0 117 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 PSMB11A5LHX3 300 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 FBXO24O75426 580 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 RAB3DO95716 219 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 PMP2P02689 132 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 ELANEP08246 267 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 AKAIN1P0CW23 69 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 RPA2P15927 270 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 PAX6P26367 422 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 MAS1LP35410 378 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 RFX2P48378 723 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 FXYD4P59646 89 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 UBE2KP61086 200 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 ERVK-16P61578 105 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 FAM209BQ5JX69 171 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 STEAP1BQ6NZ63 245 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 MRPL41Q8IXM3 137 aaKnown RBP8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 MFSD4AQ8N468 514 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 GDPD1Q8N9F7 314 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 Q8N9W7 124 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 CCDC71LQ8N9Z2 235 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 ZNF383Q8NA42 475 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 OR4F17Q8NGA8 305 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 OR52I2Q8NH67 350 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 OR4A5Q8NH83 315 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 TERB2Q8NHR7 220 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 OR4F4Q96R69 305 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 ABHD1Q96SE0 405 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 WNT10AQ9GZT5 417 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 MIXL1Q9H2W2 232 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 PLSCR3Q9NRY6 295 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 SERTAD4Q9NUC0 356 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 COMMD9Q9P000 198 aa8.16□□□□□ -1.1
TRAFD1-208ENST00000552890 CENPXA8MT69 81 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 CYB5BO43169 146 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 CNIH1O95406 144 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 HPRT1P00492 218 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 CD74P04233 296 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 TAS2R31P59538 309 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 ZNF45Q02386 682 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 CNPY1Q3B7I2 92 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 AKIRIN2Q53H80 203 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 PYDC2Q56P42 97 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 CXorf66Q5JRM2 361 aaPredicted RBP8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 THOC7Q6I9Y2 204 aaKnown RBP8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 TMEM65Q6PI78 240 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 SLC25A42Q86VD7 318 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 PPP1R27Q86WC6 154 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 NDUFA11Q86Y39 141 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 LYSMD2Q8IV50 215 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 MMD2Q8IY49 270 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 Q8N402 240 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 OR5AU1Q8NGC0 362 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 TSC22D3Q99576 134 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 PARP12Q9H0J9 701 aaKnown RBP8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 OR51J1Q9H342 316 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 PLEKHA2Q9HB19 425 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 METTL1Q9UBP6 276 aaKnown RBP8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 KLK11Q9UBX7 282 aa8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 TSSC4Q9Y5U2 329 aaPredicted RBP8.15□□□□□ -1.1
TRAFD1-208ENST00000552890 MEIS3P1A6NDR6 274 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 ARPC1BO15143 372 aaKnown RBP8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 FCGR3BO75015 233 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 CRYZL1O95825 349 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 DHFRP00374 187 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 AMY1AP04745 511 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 AMY2AP04746 511 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 NQO2P16083 231 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 F2RP25116 425 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 CRIP2P52943 208 aaPredicted RBP8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 F2RL1P55085 397 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 FOXE3Q13461 319 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 PSG5Q15238 335 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 AADACL3Q5VUY0 350 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 FAM53AQ6NSI3 398 aaPredicted RBP8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 HSD17B13Q7Z5P4 300 aaPredicted RBP8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 STPG2Q8N412 459 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 TOMM5Q8N4H5 51 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 DRAXINQ8NBI3 349 aaPredicted RBP8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 OR5M8Q8NGP6 311 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 S100ZQ8WXG8 99 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 DDB2Q92466 427 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 SPIN2AQ99865 258 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 SPIN2BQ9BPZ2 258 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 SOSTQ9BQB4 213 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 THAP7Q9BT49 309 aaPredicted RBP8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 FKBP11Q9NYL4 201 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 C14orf166Q9Y224 244 aaKnown RBP8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 SIGLEC9Q9Y336 463 aa8.14□□□□□ -1.11
TRAFD1-208ENST00000552890 IGKV1D-13A0A0B4J2D9 117 aa8.13□□□□□ -1.11
TRAFD1-208ENST00000552890 TCRBV4S1A1TA0A5B7 111 aa8.13□□□□□ -1.11
TRAFD1-208ENST00000552890 DPPA5A6NC42 116 aa8.13□□□□□ -1.11
TRAFD1-208ENST00000552890 NAP1L6A6NFF2 107 aa8.13□□□□□ -1.11
TRAFD1-208ENST00000552890 H3BUA1 57 aa8.13□□□□□ -1.11
TRAFD1-208ENST00000552890 PROP1O75360 226 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms