RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 NEURL2Q9BR09 285 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 GINS4Q9BRT9 223 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 AGMATQ9BSE5 352 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 TOLLIPQ9H0E2 274 aa9.22□□□□□ -0.93
CKAP4-202ENST00000552828 PARP12Q9H0J9 701 aaKnown RBP9.22□□□□□ -0.93
CKAP4-202ENST00000552828 EPPK1P58107 5090 aaKnown RBP9.22□□□□□ -0.93
CKAP4-202ENST00000552828 IGKV1D-8A0A087WSZ0 117 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 SAA2-SAA4A0A096LPE2 208 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 FAM25AB3EWG3 89 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 FAM25CB3EWG5 89 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 FAM25GB3EWG6 89 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 I3L521 148 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 UPK1BO75841 260 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 SAA2P0DJI9 122 aaPredicted RBP9.21□□□□□ -0.94
CKAP4-202ENST00000552828 ELK1P19419 428 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 PPIFP30405 207 aaKnown RBP9.21□□□□□ -0.94
CKAP4-202ENST00000552828 OR3A3P47888 321 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 CASC10Q5T4H9 136 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 FAM71F2Q6NXP2 309 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 CNIH2Q6PI25 160 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 ZNF833PQ6ZTB9 187 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 HOGA1Q86XE5 327 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 MUC7Q8TAX7 377 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 ABHD14BQ96IU4 210 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 ANXA10Q9UJ72 324 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 ZNF221Q9UK13 617 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 RNF150Q9ULK6 438 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 MRPS7Q9Y2R9 242 aaKnown RBP9.21□□□□□ -0.94
CKAP4-202ENST00000552828 SMAD5-AS1Q9Y6J3 95 aa9.21□□□□□ -0.94
CKAP4-202ENST00000552828 IGLV1-40P01703 118 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 OR8U8P0C7N1 319 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 OR8U9P0C7N5 309 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 PTHLHP12272 177 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 PRSS3P35030 304 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 ARPC4P59998 168 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 IFITM3Q01628 133 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 ASPHD1Q5U4P2 390 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 H1FOOQ8IZA3 346 aaPredicted RBP9.2□□□□□ -0.94
CKAP4-202ENST00000552828 GVQW1Q8N7I0 195 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 ZNF491Q8N8L2 437 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 ZBTB8BQ8NAP8 495 aaPredicted RBP9.2□□□□□ -0.94
CKAP4-202ENST00000552828 BEST4Q8NFU0 473 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 OR1N2Q8NGR9 330 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 KLK15Q9H2R5 256 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 IFT46Q9NQC8 304 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 VSIG4Q9Y279 399 aa9.2□□□□□ -0.94
CKAP4-202ENST00000552828 RBM7Q9Y580 266 aaKnown RBP9.2□□□□□ -0.94
CKAP4-202ENST00000552828 RGS5O15539 181 aa9.19□□□□□ -0.94
CKAP4-202ENST00000552828 HLA-DQB1P01920 261 aa9.19□□□□□ -0.94
CKAP4-202ENST00000552828 S100A5P33763 92 aa9.19□□□□□ -0.94
CKAP4-202ENST00000552828 ZNF616Q08AN1 781 aa9.19□□□□□ -0.94
CKAP4-202ENST00000552828 RPL39P5Q59GN2 51 aa9.19□□□□□ -0.94
CKAP4-202ENST00000552828 ZNF429Q86V71 674 aa9.19□□□□□ -0.94
CKAP4-202ENST00000552828 SBSPONQ8IVN8 264 aa9.19□□□□□ -0.94
CKAP4-202ENST00000552828 CHAC2Q8WUX2 184 aa9.19□□□□□ -0.94
CKAP4-202ENST00000552828 NABP2Q9BQ15 211 aa9.19□□□□□ -0.94
CKAP4-202ENST00000552828 ZNF251Q9BRH9 671 aa9.19□□□□□ -0.94
CKAP4-202ENST00000552828 MRPL20Q9BYC9 149 aaKnown RBP9.19□□□□□ -0.94
CKAP4-202ENST00000552828 GNB4Q9HAV0 340 aa9.19□□□□□ -0.94
CKAP4-202ENST00000552828 ZNF107Q9UII5 783 aaPredicted RBP9.19□□□□□ -0.94
CKAP4-202ENST00000552828 ADAM30Q9UKF2 790 aa9.19□□□□□ -0.94
CKAP4-202ENST00000552828 MEIS3P1A6NDR6 274 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 BOLA2-SMG1P6H3BVE0 249 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 CTDSP2O14595 271 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 TPPPO94811 219 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 PTTG1O95997 202 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 CT45A6P0DMU7 189 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 CT45A5P0DMU8 189 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 CT45A7P0DMV0 189 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 MC5RP33032 325 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 TMEM65Q6PI78 240 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 SNX29P2Q8IUI4 249 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 LYSMD2Q8IV50 215 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.18□□□□□ -0.94
CKAP4-202ENST00000552828 C15orf40Q8WUR7 153 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 RBMXL1Q96E39 390 aaKnown RBP9.18□□□□□ -0.94
CKAP4-202ENST00000552828 RCHY1Q96PM5 261 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 OR2D2Q9H210 308 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 SCPEP1Q9HB40 452 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 BIRC6Q9NR09 4857 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 STARD9Q9P2P6 4700 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 EXTL2Q9UBQ6 330 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 GAB2Q9UQC2 676 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 OR2W1Q9Y3N9 320 aa9.18□□□□□ -0.94
CKAP4-202ENST00000552828 OR5H14A6NHG9 310 aa9.17□□□□□ -0.94
CKAP4-202ENST00000552828 G3V318 75 aa9.17□□□□□ -0.94
CKAP4-202ENST00000552828 SULT1C2O00338 296 aa9.17□□□□□ -0.94
CKAP4-202ENST00000552828 HLA-DRB1P01911 266 aa9.17□□□□□ -0.94
CKAP4-202ENST00000552828 FCER2P06734 321 aa9.17□□□□□ -0.94
CKAP4-202ENST00000552828 NFYAP23511 347 aaPredicted RBP9.17□□□□□ -0.94
CKAP4-202ENST00000552828 RAB9AP51151 201 aa9.17□□□□□ -0.94
CKAP4-202ENST00000552828 GNB1P62873 340 aa9.17□□□□□ -0.94
CKAP4-202ENST00000552828 MMDQ15546 238 aa9.17□□□□□ -0.94
CKAP4-202ENST00000552828 CCDC190Q86UF4 302 aa9.17□□□□□ -0.94
CKAP4-202ENST00000552828 OR5AP2Q8NGF4 316 aa9.17□□□□□ -0.94
CKAP4-202ENST00000552828 GPX8Q8TED1 209 aa9.17□□□□□ -0.94
CKAP4-202ENST00000552828 RITA1Q96K30 269 aa9.17□□□□□ -0.94
CKAP4-202ENST00000552828 CCDC32Q9BV29 185 aa9.17□□□□□ -0.94
CKAP4-202ENST00000552828 C6orf62Q9GZU0 229 aaPredicted RBP9.17□□□□□ -0.94
CKAP4-202ENST00000552828 OR51J1Q9H342 316 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms