RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 SRSF12Q8WXF0 261 aaKnown RBP12.64□□□□□ -0.39
CACNB3-222ENST00000552465 GGHQ92820 318 aa12.64□□□□□ -0.39
CACNB3-222ENST00000552465 SELENOKQ9Y6D0 94 aa12.64□□□□□ -0.39
CACNB3-222ENST00000552465 FRAS1Q86XX4 4008 aa12.63□□□□□ -0.39
CACNB3-222ENST00000552465 PPP5D1E7EU14 171 aa12.63□□□□□ -0.39
CACNB3-222ENST00000552465 OR2C1O95371 312 aa12.63□□□□□ -0.39
CACNB3-222ENST00000552465 SRMP19623 302 aa12.63□□□□□ -0.39
CACNB3-222ENST00000552465 CBLN1P23435 193 aa12.63□□□□□ -0.39
CACNB3-222ENST00000552465 TAGLNQ01995 201 aaKnown RBP12.63□□□□□ -0.39
CACNB3-222ENST00000552465 TNFRSF9Q07011 255 aa12.63□□□□□ -0.39
CACNB3-222ENST00000552465 CBX3Q13185 183 aa12.63□□□□□ -0.39
CACNB3-222ENST00000552465 INSL4Q14641 139 aa12.63□□□□□ -0.39
CACNB3-222ENST00000552465 WFDC3Q8IUB2 231 aa12.63□□□□□ -0.39
CACNB3-222ENST00000552465 NECAP1Q8NC96 275 aa12.63□□□□□ -0.39
CACNB3-222ENST00000552465 LPAR5Q9H1C0 372 aa12.63□□□□□ -0.39
CACNB3-222ENST00000552465 C12orf4Q9NQ89 552 aa12.63□□□□□ -0.39
CACNB3-222ENST00000552465 SDHAF2Q9NX18 166 aa12.63□□□□□ -0.39
CACNB3-222ENST00000552465 KLK5Q9Y337 293 aaPredicted RBP12.63□□□□□ -0.39
CACNB3-222ENST00000552465 TRDCB7Z8K6 153 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 GGCTO75223 188 aaKnown RBP12.62□□□□□ -0.39
CACNB3-222ENST00000552465 DEDDO75618 318 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 NDUFB8O95169 186 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 HLA-AP01891 365 aaKnown RBP12.62□□□□□ -0.39
CACNB3-222ENST00000552465 UBE2KP61086 200 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 ST3GAL4Q11206 333 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 RTL8BQ17RB0 113 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 VMA21Q3ZAQ7 101 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 FAM209BQ5JX69 171 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 TTC23Q5W5X9 447 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 ZNF57Q68EA5 555 aaPredicted RBP12.62□□□□□ -0.39
CACNB3-222ENST00000552465 LYG2Q86SG7 212 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 TMEM61Q8N0U2 210 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 FAM89BQ8N5H3 189 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 TTC9CQ8N5M4 171 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 OR52B4Q8NGK2 314 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 CACNG8Q8WXS5 425 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 C5orf30Q96GV9 206 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 OR2D2Q9H210 308 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 HSF4Q9ULV5 492 aa12.62□□□□□ -0.39
CACNB3-222ENST00000552465 EFCAB10A6NFE3 127 aa12.61□□□□□ -0.39
CACNB3-222ENST00000552465 FOXI3A8MTJ6 420 aaPredicted RBP12.61□□□□□ -0.39
CACNB3-222ENST00000552465 OR2J3O76001 311 aa12.61□□□□□ -0.39
CACNB3-222ENST00000552465 BPNT1O95861 308 aa12.61□□□□□ -0.39
CACNB3-222ENST00000552465 RRASP10301 218 aa12.61□□□□□ -0.39
CACNB3-222ENST00000552465 CD37P11049 281 aa12.61□□□□□ -0.39
CACNB3-222ENST00000552465 SERPINB10P48595 397 aa12.61□□□□□ -0.39
CACNB3-222ENST00000552465 C15orf32Q32M92 178 aa12.61□□□□□ -0.39
CACNB3-222ENST00000552465 ACSM3Q53FZ2 586 aa12.61□□□□□ -0.39
CACNB3-222ENST00000552465 IDO2Q6ZQW0 420 aa12.61□□□□□ -0.39
CACNB3-222ENST00000552465 GPHB5Q86YW7 130 aa12.61□□□□□ -0.39
CACNB3-222ENST00000552465 ACOT12Q8WYK0 555 aa12.61□□□□□ -0.39
CACNB3-222ENST00000552465 PHYHIPQ92561 330 aa12.61□□□□□ -0.39
CACNB3-222ENST00000552465 URM1Q9BTM9 101 aaKnown RBP12.61□□□□□ -0.39
CACNB3-222ENST00000552465 TP53TG1Q9Y2A0 90 aa12.61□□□□□ -0.39
CACNB3-222ENST00000552465 CD3GP09693 182 aa12.6□□□□□ -0.39
CACNB3-222ENST00000552465 ATF4P18848 351 aaPredicted RBP12.6□□□□□ -0.39
CACNB3-222ENST00000552465 TMEM50BP56557 158 aa12.6□□□□□ -0.39
CACNB3-222ENST00000552465 ANKRD55Q3KP44 614 aa12.6□□□□□ -0.39
CACNB3-222ENST00000552465 RBM48Q5RL73 367 aaKnown RBP12.6□□□□□ -0.39
CACNB3-222ENST00000552465 OR4A4PQ8NGN8 299 aa12.6□□□□□ -0.39
CACNB3-222ENST00000552465 SPIN2AQ99865 258 aa12.6□□□□□ -0.39
CACNB3-222ENST00000552465 SPIN2BQ9BPZ2 258 aa12.6□□□□□ -0.39
CACNB3-222ENST00000552465 CMSS1Q9BQ75 279 aaKnown RBP12.6□□□□□ -0.39
CACNB3-222ENST00000552465 SMPD3Q9NY59 655 aaPredicted RBP12.6□□□□□ -0.39
CACNB3-222ENST00000552465 MLXQ9UH92 298 aa12.6□□□□□ -0.39
CACNB3-222ENST00000552465 PCLOQ9Y6V0 5065 aa12.6□□□□□ -0.39
CACNB3-222ENST00000552465 SPRY2O43597 315 aa12.59□□□□□ -0.39
CACNB3-222ENST00000552465 BMI1P35226 326 aa12.59□□□□□ -0.39
CACNB3-222ENST00000552465 WNT4P56705 351 aa12.59□□□□□ -0.39
CACNB3-222ENST00000552465 TPBGQ13641 420 aa12.59□□□□□ -0.39
CACNB3-222ENST00000552465 LGALS9CQ6DKI2 356 aa12.59□□□□□ -0.39
CACNB3-222ENST00000552465 Q6ZWC4 215 aa12.59□□□□□ -0.39
CACNB3-222ENST00000552465 UXS1Q8NBZ7 420 aa12.59□□□□□ -0.39
CACNB3-222ENST00000552465 OR6M1Q8NGM8 313 aa12.59□□□□□ -0.39
CACNB3-222ENST00000552465 ARHGAP5-AS1Q96IT6 56 aa12.59□□□□□ -0.39
CACNB3-222ENST00000552465 PECRQ9BY49 303 aa12.59□□□□□ -0.39
CACNB3-222ENST00000552465 ZNF430Q9H8G1 570 aaPredicted RBP12.59□□□□□ -0.39
CACNB3-222ENST00000552465 TMEM213A2RRL7 107 aa12.58□□□□□ -0.4
CACNB3-222ENST00000552465 FABP7O15540 132 aa12.58□□□□□ -0.4
CACNB3-222ENST00000552465 SCAF4O95104 1147 aaKnown RBP12.58□□□□□ -0.4
CACNB3-222ENST00000552465 CRYZL1O95825 349 aa12.58□□□□□ -0.4
CACNB3-222ENST00000552465 TM4SF20Q53R12 229 aa12.58□□□□□ -0.4
CACNB3-222ENST00000552465 IGSF11Q5DX21 431 aa12.58□□□□□ -0.4
CACNB3-222ENST00000552465 MS4A15Q8N5U1 240 aa12.58□□□□□ -0.4
CACNB3-222ENST00000552465 ZNF320A2RRD8 509 aa12.57□□□□□ -0.4
CACNB3-222ENST00000552465 MYL12BO14950 172 aa12.57□□□□□ -0.4
CACNB3-222ENST00000552465 BET1O15155 118 aa12.57□□□□□ -0.4
CACNB3-222ENST00000552465 ACTL6BO94805 426 aa12.57□□□□□ -0.4
CACNB3-222ENST00000552465 DUTP33316 252 aaKnown RBP12.57□□□□□ -0.4
CACNB3-222ENST00000552465 ARL3P36405 182 aa12.57□□□□□ -0.4
CACNB3-222ENST00000552465 MAP2K4P45985 399 aa12.57□□□□□ -0.4
CACNB3-222ENST00000552465 P2RY14Q15391 338 aa12.57□□□□□ -0.4
CACNB3-222ENST00000552465 FAM106AQ4KMX7 169 aa12.57□□□□□ -0.4
CACNB3-222ENST00000552465 C10orf55Q5SWW7 151 aa12.57□□□□□ -0.4
CACNB3-222ENST00000552465 SLC25A42Q86VD7 318 aa12.57□□□□□ -0.4
CACNB3-222ENST00000552465 C10orf67Q8IYJ2 551 aa12.57□□□□□ -0.4
CACNB3-222ENST00000552465 PQLC1Q8N2U9 271 aa12.57□□□□□ -0.4
CACNB3-222ENST00000552465 NANOGP1Q8N7R0 232 aa12.57□□□□□ -0.4
CACNB3-222ENST00000552465 OR10J5Q8NHC4 309 aa12.57□□□□□ -0.4
CACNB3-222ENST00000552465 OSR1Q8TAX0 266 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms