RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 NRIP2Q9BQI9 281 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 LXNQ9BS40 222 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 SMIM3Q9BZL3 60 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 OR2H1Q9GZK4 316 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 LAMTOR3Q9UHA4 124 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 ERG28Q9UKR5 140 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 TRAPPC2LQ9UL33 140 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 CYSLTR1Q9Y271 337 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 MIA3Q5JRA6 1907 aa4.6□□□□□ -1.67
VPS29-210ENST00000552130 A0A087WUU8 490 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 IGKV6D-21A0A0A0MT36 114 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 FAM92AA1XBS5 289 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 C9JAW5 83 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 TRAF3IP2O43734 574 aaPredicted RBP4.59□□□□□ -1.67
VPS29-210ENST00000552130 GNG7O60262 68 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 IGHV3-23P01764 117 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 ADRA2AP08913 450 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 ZNF806P0C7X5 589 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 IL1RNP18510 177 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 EVI2AP22794 236 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 ELOCQ15369 112 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 TAF9Q16594 264 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 LINC00303Q3SY05 128 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 EBLN2Q6P2I7 272 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 CEMP1Q6PRD7 247 aaPredicted RBP4.59□□□□□ -1.67
VPS29-210ENST00000552130 SSH2Q76I76 1423 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 ZNF645Q8N7E2 425 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 LINC01555Q8NAE3 123 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 C7orf33Q8WU49 177 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 SLC7A6Q92536 515 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 ARL11Q969Q4 196 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 VSIG2Q96IQ7 327 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 TMEM204Q9BSN7 226 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 PLEKHF2Q9H8W4 249 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 FGF22Q9HCT0 170 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 FAM135AQ9P2D6 1515 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 HIGD1AQ9Y241 93 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 LAMTOR2Q9Y2Q5 125 aa4.59□□□□□ -1.67
VPS29-210ENST00000552130 BCL9O00512 1426 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 IBTKQ9P2D0 1353 aaPredicted RBP4.58□□□□□ -1.68
VPS29-210ENST00000552130 LOC102725191A0A1B0GVB3 256 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 M0R2Z0 102 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 TP53I11O14683 189 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 FSTL3O95633 263 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 KDELR1P24390 212 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 GABRA2P47869 451 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 LINC00313P59037 77 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 TAS2R30P59541 319 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 ENDOGQ14249 297 aaKnown RBP4.58□□□□□ -1.68
VPS29-210ENST00000552130 MRPL2Q5T653 305 aaKnown RBP4.58□□□□□ -1.68
VPS29-210ENST00000552130 HES3Q5TGS1 186 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 PRSS54Q6PEW0 395 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 IL34Q6ZMJ4 242 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 RNF165Q6ZSG1 346 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 SMIM29Q86T20 159 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 LRP11Q86VZ4 500 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 ZNF664Q8N3J9 261 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 ZNF555Q8NEP9 628 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 OR2M3Q8NG83 312 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 OR4C6Q8NH72 309 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 MS4A6EQ96DS6 147 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 GNPNAT1Q96EK6 184 aaPredicted RBP4.58□□□□□ -1.68
VPS29-210ENST00000552130 PPP3R2Q96LZ3 170 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 TP53RKQ96S44 253 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 NDFIP1Q9BT67 221 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 PDCD10Q9BUL8 212 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 LINC00470Q9BZP3 86 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 FBXL12Q9NXK8 326 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 TAAR3PQ9P1P4 343 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 CACNG5Q9UF02 275 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 RPUSD1Q9UJJ7 312 aaKnown RBP4.58□□□□□ -1.68
VPS29-210ENST00000552130 TBX21Q9UL17 535 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 MED31Q9Y3C7 131 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 SCN10AQ9Y5Y9 1956 aa4.58□□□□□ -1.68
VPS29-210ENST00000552130 FGD6Q6ZV73 1430 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 NOTCH4Q99466 2003 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 TMEM269A0A1B0GVZ9 245 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 TMEM72A0PK05 275 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 CYSRT1A8MQ03 144 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 SLC22A1O15245 554 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 SCTP09683 121 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 SMIM10L2AP0DMW4 78 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 SMIM10L2BP0DMW5 78 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 KRTAP5-9P26371 169 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 MAXP61244 160 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 MRPS10P82664 201 aaKnown RBP4.57□□□□□ -1.68
VPS29-210ENST00000552130 DHRS2Q13268 280 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 TMEM241Q24JQ0 296 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 Q6Q795 121 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 HRCT1Q6UXD1 115 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 DEFB128Q7Z7B8 93 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 BAP18Q8IXM2 172 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 MKXQ8IYA7 352 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 C1orf174Q8IYL3 243 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 NPBQ8NG41 125 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 ERMAPQ96PL5 475 aaPredicted RBP4.57□□□□□ -1.68
VPS29-210ENST00000552130 OR2A5Q96R48 311 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 CCL13Q99616 98 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 LPAR5Q9H1C0 372 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 TVP23BQ9NYZ1 205 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms