RNA–Protein interactions for RNA: ENST00000552008.5

LIMA1-209, Transcript of LIM domain and actin binding 1, humanhuman

TSL 5

Gene LIMA1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-209ENST00000552008 IHHQ14623 411 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 OR4D1Q15615 310 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 TOMM34Q15785 309 aaPredicted RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 VAMP3Q15836 100 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 MOGQ16653 247 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 LIN52Q52LA3 116 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 CLEC6AQ6EIG7 209 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 ZFAND6Q6FIF0 208 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 GLYATQ6IB77 296 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SLC48A1Q6P1K1 146 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 TTC33Q6PID6 262 aaPredicted RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SBSNQ6UWP8 590 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 ASCL4Q6XD76 172 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 ZCCHC23Q6ZST2 131 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SSX6Q7RTT6 188 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 COMMD6Q7Z4G1 85 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 RPS19BP1Q86WX3 136 aaKnown RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 C1orf174Q8IYL3 243 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 DEFB107AQ8IZN7 70 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SLC25A45Q8N413 288 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 OR4K17Q8NGC6 315 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 OR52L1Q8NGH7 329 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 OR52E4Q8NGH9 312 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 OR2Y1Q8NGV0 311 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 OR6K3Q8NGY3 331 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 OR8K3Q8NH51 312 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 FAM57AQ8TBR7 257 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SCGB1C1Q8TD33 95 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 C16orf78Q8WTQ4 265 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 ITFG2Q969R8 447 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SLC35B4Q969S0 331 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 DDIT4LQ96D03 193 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 MS4A6EQ96DS6 147 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 CPNE2Q96FN4 548 aaPredicted RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 RMND5BQ96G75 393 aaPredicted RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 PYURFQ96I23 114 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 ADTRPQ96IZ2 230 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 ARL5BQ96KC2 179 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SLC35G5Q96KT7 338 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 PPP1R36Q96LQ0 422 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 YPEL4Q96NS1 127 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 TRNT1Q96Q11 434 aaKnown RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 RBP7Q96R05 134 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 STACQ99469 402 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SHANK2-AS3Q9BTD1 123 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 DOHHQ9BU89 302 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 C9orf16Q9BUW7 83 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 HINT2Q9BX68 163 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 MS4A8Q9BY19 250 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 PLA2G12AQ9BZM1 189 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 TRIM4Q9C037 500 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 OR8D2Q9GZM6 311 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SYT4Q9H2B2 425 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 PRORYQ9H606 182 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 XKR8Q9H6D3 395 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 PLEKHF2Q9H8W4 249 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 LINC00574Q9H8X3 128 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 C12orf4Q9NQ89 552 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 DIABLOQ9NR28 239 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 CA10Q9NS85 328 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 TAS2R1Q9NYW7 299 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 EMC3Q9P0I2 261 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SLC23A2Q9UGH3 650 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 C3orf18Q9UK00 162 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 FBXL3Q9UKT7 428 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 BAIAP2Q9UQB8 552 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 BTRCQ9Y297 605 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 KLF13Q9Y2Y9 288 aaPredicted RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 RNF11Q9Y3C5 154 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 TIMM22Q9Y584 194 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 AP4S1Q9Y587 144 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 DNAJC15Q9Y5T4 150 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 SIPA1L1O43166 1804 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 ATAD5Q96QE3 1844 aa1.21□□□□□ -2.22
LIMA1-209ENST00000552008 RBBP6Q7Z6E9 1792 aaKnown RBP1.21□□□□□ -2.22
LIMA1-209ENST00000552008 DYSFO75923 2080 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 SVILO95425 2214 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 PARP14Q460N5 1801 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 TRAV17A0A0B4J275 112 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 PIGBOS1A0A0B4J2F0 54 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 LOC389332A0A1B0GUA5 103 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 A0A1W2PRG6 482 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 DHRS12A0PJE2 317 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 IZUMO1RA6ND01 250 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 RIIAD1A6NNX1 92 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 C16orf90A8MZG2 172 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 FTCDNL1E5RQL4 147 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 H0YJX3 145 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 K7EN84 100 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 K7ERS5 55 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 CXCR6O00574 342 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 PHYHO14832 338 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 SCN2BO60939 215 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 BANF1O75531 89 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 SC5DO75845 299 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 PIAS1O75925 651 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 SNAPC5O75971 98 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 GADD45GO95257 159 aa1.2□□□□□ -2.22
LIMA1-209ENST00000552008 AHSA1O95433 338 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms