RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 S100A14Q9HCY8 104 aa10.69□□□□□ -0.7
CHMP1A-210ENST00000551981 AKIP1Q9NQ31 210 aa10.69□□□□□ -0.7
CHMP1A-210ENST00000551981 ZC4H2Q9NQZ6 224 aa10.69□□□□□ -0.7
CHMP1A-210ENST00000551981 FAM53CQ9NYF3 392 aa10.69□□□□□ -0.7
CHMP1A-210ENST00000551981 ZNF230Q9UIE0 474 aaPredicted RBP10.69□□□□□ -0.7
CHMP1A-210ENST00000551981 KMT2AQ03164 3969 aa10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 IGKV1-6A0A0C4DH72 117 aa10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 NUPR2A6NF83 97 aa10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 TRDCB7Z8K6 153 aa10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 RBMXL2O75526 392 aaKnown RBP10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 FOLR2P14207 255 aa10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 KIR2DS2P43631 304 aa10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 TPBGQ13641 420 aa10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 PRSS8Q16651 343 aa10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 HSD17B12Q53GQ0 312 aa10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 TEX45Q8NA69 505 aa10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 NECAP1Q8NC96 275 aa10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 OR4A4PQ8NGN8 299 aa10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 SRSF12Q8WXF0 261 aaKnown RBP10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 CMSS1Q9BQ75 279 aaKnown RBP10.68□□□□□ -0.7
CHMP1A-210ENST00000551981 C2orf70A6NJV1 201 aa10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 CREBL2O60519 120 aaPredicted RBP10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 ACTL6BO94805 426 aa10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 UBE2KP61086 200 aa10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 MRPS15P82914 257 aaKnown RBP10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 PMS2P11Q13670 270 aa10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 INSL4Q14641 139 aa10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 FAM89BQ8N5H3 189 aa10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 ACOT12Q8WYK0 555 aa10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 DDB2Q92466 427 aa10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 WDR89Q96FK6 387 aaPredicted RBP10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 SPIN2AQ99865 258 aa10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 SPIN2BQ9BPZ2 258 aa10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 GGTLC1Q9BX51 225 aa10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 SDHAF2Q9NX18 166 aa10.67□□□□□ -0.7
CHMP1A-210ENST00000551981 TRBV9A0A0B4J1U6 114 aa10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 SRRM4A7MD48 611 aaKnown RBP10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 BET1O15155 118 aa10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 GGCTO75223 188 aaKnown RBP10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 PRH1P02810 166 aa10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 MAP2K4P45985 399 aa10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 ZNF45Q02386 682 aa10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 MRGPRG-AS1Q2M3A8 158 aa10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 AHSA2Q719I0 299 aa10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 CEACAM19Q7Z692 300 aa10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 NANOGP1Q8N7R0 232 aa10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 OR10J5Q8NHC4 309 aa10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 ARHGAP5-AS1Q96IT6 56 aa10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 ADTRPQ96IZ2 230 aa10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 OVOL2Q9BRP0 275 aa10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 PLGRKTQ9HBL7 147 aa10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 RBM7Q9Y580 266 aaKnown RBP10.66□□□□□ -0.7
CHMP1A-210ENST00000551981 LOC102724200A0A096LPH7 203 aaPredicted RBP10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 FOXI3A8MTJ6 420 aaPredicted RBP10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 PPP5D1E7EU14 171 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 LGALS9O00182 355 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 FABP7O15540 132 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 NDUFB8O95169 186 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 CD37P11049 281 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 P2RY14Q15391 338 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 C15orf32Q32M92 178 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 ANKRD55Q3KP44 614 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 IDO2Q6ZQW0 420 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 SLC25A42Q86VD7 318 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 TTC9CQ8N5M4 171 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 OR56B1Q8NGI3 324 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 OR52B4Q8NGK2 314 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 OSR1Q8TAX0 266 aaPredicted RBP10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 PECRQ9BY49 303 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 PSORS1C1Q9UIG5 152 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 DNAH10Q8IVF4 4471 aa10.65□□□□□ -0.7
CHMP1A-210ENST00000551981 DIRAS3O95661 229 aa10.64□□□□□ -0.71
CHMP1A-210ENST00000551981 CRYZL1O95825 349 aa10.64□□□□□ -0.71
CHMP1A-210ENST00000551981 CD3GP09693 182 aa10.64□□□□□ -0.71
CHMP1A-210ENST00000551981 TMEM50BP56557 158 aa10.64□□□□□ -0.71
CHMP1A-210ENST00000551981 ZNF57Q68EA5 555 aaPredicted RBP10.64□□□□□ -0.71
CHMP1A-210ENST00000551981 DHRSXQ8N5I4 330 aa10.64□□□□□ -0.71
CHMP1A-210ENST00000551981 CABLES2Q9BTV7 478 aa10.64□□□□□ -0.71
CHMP1A-210ENST00000551981 MND1Q9BWT6 205 aa10.64□□□□□ -0.71
CHMP1A-210ENST00000551981 ZNF430Q9H8G1 570 aaPredicted RBP10.64□□□□□ -0.71
CHMP1A-210ENST00000551981 KLK5Q9Y337 293 aaPredicted RBP10.64□□□□□ -0.71
CHMP1A-210ENST00000551981 TRBV6-7A0A0A0MS04 114 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 ERICH4A6NGS2 130 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 SLC17A2O00624 439 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 OR2J3O76001 311 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 OR2C1O95371 312 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 HLA-AP01891 365 aaKnown RBP10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 UCHL1P09936 223 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 EDN2P20800 178 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 CBLN1P23435 193 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 RANBP1P43487 201 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 CDK10Q15131 360 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 RAB11BQ15907 218 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 IGSF11Q5DX21 431 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 CEMP1Q6PRD7 247 aaPredicted RBP10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 GPHB5Q86YW7 130 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 MMD2Q8IY49 270 aa10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 C8orf59Q8N0T1 100 aaPredicted RBP10.63□□□□□ -0.71
CHMP1A-210ENST00000551981 TMEM61Q8N0U2 210 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms