RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 HARBI1Q96MB7 349 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 HSPB9Q9BQS6 159 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 ZNF2Q9BSG1 426 aaPredicted RBP13.67□□□□□ -0.22
CDK4-208ENST00000551706 DCUN1D5Q9BTE7 237 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 A3GALT2U3KPV4 340 aa13.67□□□□□ -0.22
CDK4-208ENST00000551706 LINC00473A8K010 186 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 CTDSPLO15194 276 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 SHOXO15266 292 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 OPN1MWP04001 364 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 IGF1P05019 195 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 OPN1MW2P0DN77 364 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 OPN1MW3P0DN78 364 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 TSPAN5P62079 268 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 IL18Q14116 193 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 PSG5Q15238 335 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 VAX1Q5SQQ9 334 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 NDUFA11Q86Y39 141 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 OSR1Q8TAX0 266 aaPredicted RBP13.66□□□□□ -0.22
CDK4-208ENST00000551706 MOB3AQ96BX8 217 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 NOL4LQ96MY1 436 aaPredicted RBP13.66□□□□□ -0.22
CDK4-208ENST00000551706 FBXL15Q9H469 300 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 CCL28Q9NRJ3 127 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 METTL1Q9UBP6 276 aaKnown RBP13.66□□□□□ -0.22
CDK4-208ENST00000551706 KLK11Q9UBX7 282 aa13.66□□□□□ -0.22
CDK4-208ENST00000551706 A6NHS1 94 aa13.65□□□□□ -0.22
CDK4-208ENST00000551706 LINC01548A6NM66 108 aa13.65□□□□□ -0.22
CDK4-208ENST00000551706 CRYZL1O95825 349 aa13.65□□□□□ -0.22
CDK4-208ENST00000551706 VDAC1P21796 283 aa13.65□□□□□ -0.22
CDK4-208ENST00000551706 TNFSF8P32971 234 aa13.65□□□□□ -0.22
CDK4-208ENST00000551706 CD83Q01151 205 aa13.65□□□□□ -0.22
CDK4-208ENST00000551706 EIF4EBP1Q13541 118 aaPredicted RBP13.65□□□□□ -0.22
CDK4-208ENST00000551706 RNASE12Q5GAN4 147 aaKnown RBP13.65□□□□□ -0.22
CDK4-208ENST00000551706 TMEM17Q86X19 198 aa13.65□□□□□ -0.22
CDK4-208ENST00000551706 C1QL4Q86Z23 238 aa13.65□□□□□ -0.22
CDK4-208ENST00000551706 TCTEX1D2Q8WW35 142 aa13.65□□□□□ -0.22
CDK4-208ENST00000551706 CITED2Q99967 270 aaPredicted RBP13.65□□□□□ -0.22
CDK4-208ENST00000551706 OR51J1Q9H342 316 aa13.65□□□□□ -0.22
CDK4-208ENST00000551706 TAS2R8Q9NYW2 309 aa13.65□□□□□ -0.22
CDK4-208ENST00000551706 IGHV7-81A0A0B4J1V7 117 aa13.64□□□□□ -0.23
CDK4-208ENST00000551706 FCGR3BO75015 233 aa13.64□□□□□ -0.23
CDK4-208ENST00000551706 IFNA6P05013 189 aa13.64□□□□□ -0.23
CDK4-208ENST00000551706 CSF1P09603 554 aa13.64□□□□□ -0.23
CDK4-208ENST00000551706 S100A5P33763 92 aa13.64□□□□□ -0.23
CDK4-208ENST00000551706 KIR2DS2P43631 304 aa13.64□□□□□ -0.23
CDK4-208ENST00000551706 TAS2R19P59542 299 aa13.64□□□□□ -0.23
CDK4-208ENST00000551706 RPL30P62888 115 aaKnown RBP13.64□□□□□ -0.23
CDK4-208ENST00000551706 CATR1Q13166 79 aa13.64□□□□□ -0.23
CDK4-208ENST00000551706 RNASE10Q5GAN6 216 aaKnown RBP13.64□□□□□ -0.23
CDK4-208ENST00000551706 ZNF329Q86UD4 541 aa13.64□□□□□ -0.23
CDK4-208ENST00000551706 MFSD4AQ8N468 514 aa13.64□□□□□ -0.23
CDK4-208ENST00000551706 TMEM229BQ8NBD8 167 aa13.64□□□□□ -0.23
CDK4-208ENST00000551706 OR4S2Q8NH73 311 aa13.64□□□□□ -0.23
CDK4-208ENST00000551706 SMIM4Q8WVI0 70 aa13.64□□□□□ -0.23
CDK4-208ENST00000551706 DGCR14Q96DF8 476 aaKnown RBP13.64□□□□□ -0.23
CDK4-208ENST00000551706 LINC00527Q9UJ94 153 aa13.64□□□□□ -0.23
CDK4-208ENST00000551706 FABP12A6NFH5 140 aa13.63□□□□□ -0.23
CDK4-208ENST00000551706 SLC25A17O43808 307 aa13.63□□□□□ -0.23
CDK4-208ENST00000551706 IGLV2-23P01705 113 aa13.63□□□□□ -0.23
CDK4-208ENST00000551706 DGCR2P98153 550 aa13.63□□□□□ -0.23
CDK4-208ENST00000551706 VMA21Q3ZAQ7 101 aa13.63□□□□□ -0.23
CDK4-208ENST00000551706 LPCAT3Q6P1A2 487 aa13.63□□□□□ -0.23
CDK4-208ENST00000551706 TEX38Q6PEX7 206 aa13.63□□□□□ -0.23
CDK4-208ENST00000551706 ZNF562Q6V9R5 426 aa13.63□□□□□ -0.23
CDK4-208ENST00000551706 ZNF818PQ6ZRF7 136 aa13.63□□□□□ -0.23
CDK4-208ENST00000551706 PPP1R27Q86WC6 154 aa13.63□□□□□ -0.23
CDK4-208ENST00000551706 CMTM1Q8IZ96 169 aa13.63□□□□□ -0.23
CDK4-208ENST00000551706 ARRDC1Q8N5I2 433 aa13.63□□□□□ -0.23
CDK4-208ENST00000551706 PARP11Q9NR21 331 aa13.63□□□□□ -0.23
CDK4-208ENST00000551706 TSSC4Q9Y5U2 329 aaPredicted RBP13.63□□□□□ -0.23
CDK4-208ENST00000551706 TCRBV4S1A1TA0A5B7 111 aa13.62□□□□□ -0.23
CDK4-208ENST00000551706 TNFSF12O43508 249 aa13.62□□□□□ -0.23
CDK4-208ENST00000551706 S100GP29377 79 aa13.62□□□□□ -0.23
CDK4-208ENST00000551706 GNRHRP30968 328 aa13.62□□□□□ -0.23
CDK4-208ENST00000551706 UBE2KP61086 200 aa13.62□□□□□ -0.23
CDK4-208ENST00000551706 CX3CL1P78423 397 aa13.62□□□□□ -0.23
CDK4-208ENST00000551706 C10orf99Q6UWK7 81 aa13.62□□□□□ -0.23
CDK4-208ENST00000551706 TEX45Q8NA69 505 aa13.62□□□□□ -0.23
CDK4-208ENST00000551706 SOSTQ9BQB4 213 aa13.62□□□□□ -0.23
CDK4-208ENST00000551706 M0QYG6 137 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 FCN1O00602 326 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 ATP6V0E1O15342 81 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 RBFOX2O43251 390 aaKnown RBP eCLIP13.61□□□□□ -0.234e-10■■■■■ 35.5
CDK4-208ENST00000551706 GSTZ1O43708 216 aaPredicted RBP13.61□□□□□ -0.23
CDK4-208ENST00000551706 CREBL2O60519 120 aaPredicted RBP13.61□□□□□ -0.23
CDK4-208ENST00000551706 CA2P00918 260 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 CD3DP04234 171 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 CRYGBP07316 175 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 UCP3P55916 312 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 TMEM267Q0VDI3 215 aaPredicted RBP13.61□□□□□ -0.23
CDK4-208ENST00000551706 NSUN5P1Q3KNT7 163 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 OR2B11Q5JQS5 317 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 TCTEX1D4Q5JR98 221 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 POC5Q8NA72 575 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 CD300LFQ8TDQ1 290 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 CLCC1Q96S66 551 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 AIFM2Q9BRQ8 373 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 FXYD6Q9H0Q3 95 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 ZFP57Q9NU63 452 aa13.61□□□□□ -0.23
CDK4-208ENST00000551706 SRRM4A7MD48 611 aaKnown RBP13.6□□□□□ -0.23
CDK4-208ENST00000551706 GPR31O00270 319 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms