RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 LINC00473A8K010 186 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 KIAA1324LA8MWY0 1029 aaPredicted RBP8.46□□□□□ -1.06
CNOT2-229ENST00000551179 TMEM178BH3BS89 294 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 M0R036 132 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 MPDU1O75352 247 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 C1QL1O75973 258 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 IFNA10P01566 189 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 P0C879 139 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 FGF7P21781 194 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 OR2B8PP59922 312 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 HOXA4Q00056 320 aaPredicted RBP8.46□□□□□ -1.06
CNOT2-229ENST00000551179 RUNX1Q01196 453 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 FBXL19-AS1Q494R0 122 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 FAM201AQ5SY85 155 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 NCR3LG1Q68D85 454 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 Q6ZRM9 215 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 SFT2D1Q8WV19 159 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 CCL17Q92583 94 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 TAF15Q92804 592 aaKnown RBP eCLIP8.46□□□□□ -1.06
CNOT2-229ENST00000551179 C5orf30Q96GV9 206 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 WFIKKN1Q96NZ8 548 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 HEYLQ9NQ87 328 aaPredicted RBP8.46□□□□□ -1.06
CNOT2-229ENST00000551179 SMCO4Q9NRQ5 59 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 FKBP11Q9NYL4 201 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 RPUSD1Q9UJJ7 312 aaKnown RBP8.46□□□□□ -1.06
CNOT2-229ENST00000551179 PRNDQ9UKY0 176 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 SPEGQ15772 3267 aa8.46□□□□□ -1.06
CNOT2-229ENST00000551179 SAA2-SAA4A0A096LPE2 208 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 IGHV1-69-2A0A0G2JMI3 117 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 MEX3AA1L020 520 aaKnown RBP8.45□□□□□ -1.06
CNOT2-229ENST00000551179 H7C2Y5 167 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 ZG16O60844 167 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 HSPB1P04792 205 aaKnown RBP8.45□□□□□ -1.06
CNOT2-229ENST00000551179 SAA2P0DJI9 122 aaPredicted RBP8.45□□□□□ -1.06
CNOT2-229ENST00000551179 ADCYAP1P18509 176 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 LOXL3P58215 753 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 RHEBQ15382 184 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 C17orf58Q2M2W7 97 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 ACOT6Q3I5F7 207 aaPredicted RBP8.45□□□□□ -1.06
CNOT2-229ENST00000551179 AKIRIN2Q53H80 203 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 RPL39P5Q59GN2 51 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 SOHLH1Q5JUK2 328 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 FAM71F2Q6NXP2 309 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 SSX9Q7RTT3 188 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 MRPL41Q8IXM3 137 aaKnown RBP8.45□□□□□ -1.06
CNOT2-229ENST00000551179 CA5BP1Q8WTZ4 195 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 ZNF251Q9BRH9 671 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 AGMATQ9BSE5 352 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 GGACTQ9BVM4 153 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 SLC35D1Q9NTN3 355 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 TMEM140Q9NV12 185 aa8.45□□□□□ -1.06
CNOT2-229ENST00000551179 SHANK1Q9Y566 2161 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 TRBV23-1A0A0A0MS06 115 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.44□□□□□ -1.06
CNOT2-229ENST00000551179 SMCO3A2RU48 225 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 SHISA9B4DS77 424 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 PPIHO43447 177 aaKnown RBP8.44□□□□□ -1.06
CNOT2-229ENST00000551179 SELLP14151 372 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 ID4P47928 161 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 RAB13P51153 203 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 ELLP55199 621 aaPredicted RBP8.44□□□□□ -1.06
CNOT2-229ENST00000551179 GNB2P62879 340 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 SRSF3P84103 164 aaKnown RBP8.44□□□□□ -1.06
CNOT2-229ENST00000551179 RAB31Q13636 194 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 GUCA2BQ16661 112 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 KHDC3LQ587J8 217 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 RBMS3Q6XE24 437 aaKnown RBP8.44□□□□□ -1.06
CNOT2-229ENST00000551179 SLC25A48Q6ZT89 311 aaKnown RBP8.44□□□□□ -1.06
CNOT2-229ENST00000551179 OR10X1Q8NGY0 326 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 VSTM2AQ8TAG5 236 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 NEIL1Q96FI4 390 aaPredicted RBP8.44□□□□□ -1.06
CNOT2-229ENST00000551179 OR4C12Q96R67 309 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 RSG1Q9BU20 258 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 QTRT1Q9BXR0 403 aaKnown RBP8.44□□□□□ -1.06
CNOT2-229ENST00000551179 ACTR3CQ9C0K3 210 aaPredicted RBP8.44□□□□□ -1.06
CNOT2-229ENST00000551179 LINC00574Q9H8X3 128 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 PLEKHA3Q9HB20 300 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 RPS10P5Q9NQ39 176 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 SLC39A9Q9NUM3 307 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 FAM186AA6NE01 2351 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 FRYLO94915 3013 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 CHD3Q12873 2000 aaKnown RBP8.44□□□□□ -1.06
CNOT2-229ENST00000551179 GTF3C1Q12789 2109 aa8.44□□□□□ -1.06
CNOT2-229ENST00000551179 CNOT1A5YKK6 2376 aaKnown RBP8.43□□□□□ -1.06
CNOT2-229ENST00000551179 TRAV1-1A0A0B4J248 108 aa8.43□□□□□ -1.06
CNOT2-229ENST00000551179 hCG_1809904A0A1W2PP81 198 aa8.43□□□□□ -1.06
CNOT2-229ENST00000551179 A0A1W2PPE2 198 aa8.43□□□□□ -1.06
CNOT2-229ENST00000551179 A0A1W2PR64 198 aa8.43□□□□□ -1.06
CNOT2-229ENST00000551179 A0A1W2PRV1 198 aa8.43□□□□□ -1.06
CNOT2-229ENST00000551179 MAP1LC3B2A6NCE7 125 aa8.43□□□□□ -1.06
CNOT2-229ENST00000551179 C15orf61A6NNL5 157 aa8.43□□□□□ -1.06
CNOT2-229ENST00000551179 E7EQL1 145 aa8.43□□□□□ -1.06
CNOT2-229ENST00000551179 DNASE2O00115 360 aaPredicted RBP8.43□□□□□ -1.06
CNOT2-229ENST00000551179 IFNA4P05014 189 aa8.43□□□□□ -1.06
CNOT2-229ENST00000551179 CGB3P0DN86 165 aa8.43□□□□□ -1.06
CNOT2-229ENST00000551179 CGB7P0DN87 165 aa8.43□□□□□ -1.06
CNOT2-229ENST00000551179 FHITP49789 147 aa8.43□□□□□ -1.06
CNOT2-229ENST00000551179 CEBPGP53567 150 aa8.43□□□□□ -1.06
CNOT2-229ENST00000551179 ATP5IP56385 69 aaPredicted RBP8.43□□□□□ -1.06
CNOT2-229ENST00000551179 SPRNQ5BIV9 151 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms