RNA–Protein interactions for RNA: ENST00000550867.5

LMBR1L-216, Transcript of limb development membrane protein 1 like, humanhuman

TSL 1 (best)

Gene LMBR1L, Length 2,800 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-216ENST00000550867 CCL21O00585 134 aa11.51□□□□□ -0.57
LMBR1L-216ENST00000550867 SAA2P0DJI9 122 aaPredicted RBP11.51□□□□□ -0.57
LMBR1L-216ENST00000550867 KLRB1Q12918 225 aa11.51□□□□□ -0.57
LMBR1L-216ENST00000550867 PRAMEF5Q5TYX0 476 aa11.51□□□□□ -0.57
LMBR1L-216ENST00000550867 TMEM88Q6PEY1 159 aa11.51□□□□□ -0.57
LMBR1L-216ENST00000550867 SPSB3Q6PJ21 355 aa11.51□□□□□ -0.57
LMBR1L-216ENST00000550867 TMEM14EPQ6UXP3 125 aa11.51□□□□□ -0.57
LMBR1L-216ENST00000550867 SSX8Q7RTT4 187 aa11.51□□□□□ -0.57
LMBR1L-216ENST00000550867 QTRT1Q9BXR0 403 aaKnown RBP11.51□□□□□ -0.57
LMBR1L-216ENST00000550867 LAMP3Q9UQV4 416 aa11.51□□□□□ -0.57
LMBR1L-216ENST00000550867 TMEM178BH3BS89 294 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 HPRT1P00492 218 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 CASP6P55212 293 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 HNF4GQ14541 408 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 CD300LFQ8TDQ1 290 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 DTD1Q8TEA8 209 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 EGLN1Q9GZT9 426 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 IDI2-AS1Q9NZ38 188 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 SLC25A10Q9UBX3 287 aaPredicted RBP11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 HBG1P69891 147 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 HBG2P69892 147 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 AKR1C8PQ5T2L2 129 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 LYPD2Q6UXB3 125 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 LYG1Q8N1E2 194 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 ZNF439Q8NDP4 499 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 ZNF251Q9BRH9 671 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 VSIRQ9H7M9 311 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 DYNLRB1Q9NP97 96 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 ITPR1Q14643 2758 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 PPIAL4EA0A075B759 164 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 TRAV38-1A0A0B4J264 116 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 PPIAL4DF5H284 164 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 PPIAL4FP0DN26 164 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 SLC38A11Q08AI6 406 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 DDB2Q92466 427 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 S1PR3Q99500 378 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 RARRES2Q99969 163 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 TMEM106BQ9NUM4 274 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 PPIAL4AQ9Y536 164 aa11.5□□□□□ -0.57
LMBR1L-216ENST00000550867 TRAV3A0A0B4J244 114 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 UBE2L5PA0A1B0GUS4 154 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 NKX6-3A6NJ46 265 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 ZNF729A6NN14 1252 aaPredicted RBP11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 H2AFB1P0C5Y9 115 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 C1QTNF9P0C862 333 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 PLA2G5P39877 138 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 RAB7AP51149 207 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 COMMD1Q8N668 190 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 SCGB1C1Q8TD33 95 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 ANKHD1Q8IWZ3 2542 aaKnown RBP11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 CEBPZOSA8MTT3 80 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 VSTM5A8MXK1 200 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 CCL3L1P16619 93 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 LRRC75BQ2VPJ9 315 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 CBLN2Q8IUK8 224 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 CORO2AQ92828 525 aa11.49□□□□□ -0.57
LMBR1L-216ENST00000550867 PMS2P5A8MQ11 134 aa11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 ITGB1BP1O14713 200 aa11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 SIAH2O43255 324 aa11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 PPIHO43447 177 aaKnown RBP11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 CD3EP07766 207 aa11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 MRPS11P82912 194 aaKnown RBP11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 ST6GALNAC3Q8NDV1 305 aa11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 FAM216AQ8WUB2 273 aa11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 SFT2D1Q8WV19 159 aa11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 WDR61Q9GZS3 305 aaKnown RBP11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 RAB9BQ9NP90 201 aa11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 PRELID3BQ9Y3B1 194 aa11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 hADV38S2A0JD32 116 aa11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 RPL31P62899 125 aaKnown RBP11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 TAGLNQ01995 201 aaKnown RBP11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 PEA15Q15121 130 aa11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 C1orf87Q8N0U7 546 aa11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 LINC00574Q9H8X3 128 aa11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 RPUSD1Q9UJJ7 312 aaKnown RBP11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 ABCA4P78363 2273 aa11.48□□□□□ -0.57
LMBR1L-216ENST00000550867 SNAPINO95295 136 aa11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 IFNA17P01571 189 aa11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 APOBEC3AP31941 199 aaPredicted RBP11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 ADORA2A-AS1P86434 159 aa11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 SP5Q6BEB4 398 aaPredicted RBP11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 ZNF383Q8NA42 475 aa11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 RPRMQ9NS64 109 aa11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 GAB2Q9UQC2 676 aa11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 LINC00312Q9Y6C7 94 aa11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 LOC105371267A0A1B0GV96 52 aa11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 RBFOX2O43251 390 aaKnown RBP eCLIP11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 ATF4P18848 351 aaPredicted RBP11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 CHRNB4P30926 498 aa11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 CISD1Q9NZ45 108 aaKnown RBP11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 CTSZQ9UBR2 303 aa11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 TPRP12270 2363 aaKnown RBP11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 HRNRQ86YZ3 2850 aaPredicted RBP11.47□□□□□ -0.57
LMBR1L-216ENST00000550867 EIF3GO75821 320 aaKnown RBP eCLIP11.46□□□□□ -0.57
LMBR1L-216ENST00000550867 NQO2P16083 231 aa11.46□□□□□ -0.57
LMBR1L-216ENST00000550867 TMEM200BQ69YZ2 307 aa11.46□□□□□ -0.57
LMBR1L-216ENST00000550867 ETV3LQ6ZN32 361 aa11.46□□□□□ -0.57
LMBR1L-216ENST00000550867 LFNGQ8NES3 379 aa11.46□□□□□ -0.57
LMBR1L-216ENST00000550867 H1FXQ92522 213 aaKnown RBP11.46□□□□□ -0.57
LMBR1L-216ENST00000550867 TAF15Q92804 592 aaKnown RBP eCLIP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms