RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 GID8Q9NWU2 228 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 TFR2Q9UP52 801 aa2.65□□□□□ -1.99
LIMA1-205ENST00000550592 SCN3AQ9NY46 2000 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 EXPH5Q8NEV8 1989 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 IGHV3OR16-8A0A075B7F1 116 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 TRAV8-6A0A0B4J262 113 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 MGAT4DA6NG13 374 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 B4DSR2 109 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 J3QT63 122 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 SNRNP200O75643 2136 aaKnown RBP2.64□□□□□ -1.99
LIMA1-205ENST00000550592 OR5AL1P0C617 328 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 PTNP21246 168 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 GALR1P47211 349 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 TSPAN5P62079 268 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 ZCWPW2Q504Y3 356 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 KLHL12Q53G59 568 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 FAM27D1Q5T7N8 215 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 DUPD1Q68J44 220 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 PRSS54Q6PEW0 395 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 C4orf22Q6V702 233 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 FAM183BPQ6ZVS7 135 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 SYCE1Q8N0S2 351 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 ORMDL3Q8N138 153 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 ZCCHC24Q8N2G6 241 aaKnown RBP2.64□□□□□ -1.99
LIMA1-205ENST00000550592 TCAIMQ8N3R3 496 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 OR2Z1Q8NG97 314 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 KLF14Q8TD94 323 aaPredicted RBP2.64□□□□□ -1.99
LIMA1-205ENST00000550592 RASSF5Q8WWW0 418 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 NELFBQ8WX92 580 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 TMIGD2Q96BF3 282 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 WDR34Q96EX3 536 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 CHMP6Q96FZ7 201 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 RNF170Q96K19 258 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 GPR82Q96P67 336 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 MAP1LC3CQ9BXW4 147 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 C6orf62Q9GZU0 229 aaPredicted RBP2.64□□□□□ -1.99
LIMA1-205ENST00000550592 CBLN4Q9NTU7 201 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 TAS2R5Q9NYW4 299 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 CD300AQ9UGN4 299 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 RPUSD1Q9UJJ7 312 aaKnown RBP2.64□□□□□ -1.99
LIMA1-205ENST00000550592 SACSQ9NZJ4 4579 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 KIAA1109Q2LD37 5005 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 DYNC2H1Q8NCM8 4307 aaKnown RBP2.64□□□□□ -1.99
LIMA1-205ENST00000550592 DNAH1Q9P2D7 4330 aa2.64□□□□□ -1.99
LIMA1-205ENST00000550592 A0A1B0GVG6 124 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 TRPC5OSA6NMA1 111 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 A8MWL6 223 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 TMEM114B3SHH9 223 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 HSBP1L1C9JCN9 74 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 K7EIL1 84 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 CALUO43852 315 aaPredicted RBP2.63□□□□□ -1.99
LIMA1-205ENST00000550592 OR7C2O60412 319 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 CRYBA1P05813 215 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 CRHP06850 196 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 SNRPAP09012 282 aaKnown RBP2.63□□□□□ -1.99
LIMA1-205ENST00000550592 SYT1P21579 422 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 PAX6P26367 422 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 HTR2CP28335 458 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 HTR2BP41595 481 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 OR4D2P58180 307 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 RPL26P61254 145 aaKnown RBP2.63□□□□□ -1.99
LIMA1-205ENST00000550592 BAMBIQ13145 260 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 STX3Q13277 289 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 NCMAPQ5T1S8 102 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 PRR9Q5T870 116 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 MORN3Q6PF18 240 aaPredicted RBP2.63□□□□□ -1.99
LIMA1-205ENST00000550592 DEGS2Q6QHC5 323 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 IFT20Q8IY31 132 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 LYPD1Q8N2G4 141 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 CCNYL1Q8N7R7 359 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 CYB561A3Q8NBI2 242 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 PLPP5Q8NEB5 264 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 LRRC39Q96DD0 335 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 LYSMD1Q96S90 227 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 DHRS9Q9BPW9 319 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 MARVELD1Q9BSK0 173 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 DIABLOQ9NR28 239 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 CA10Q9NS85 328 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 PAQR5Q9NXK6 330 aaPredicted RBP2.63□□□□□ -1.99
LIMA1-205ENST00000550592 TAS2R7Q9NYW3 318 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 RPL26L1Q9UNX3 145 aaKnown RBP2.63□□□□□ -1.99
LIMA1-205ENST00000550592 SLC7A11Q9UPY5 501 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 ABCA13Q86UQ4 5058 aa2.63□□□□□ -1.99
LIMA1-205ENST00000550592 IGKV1-6A0A0C4DH72 117 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 A0A0G2JMM0 328 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 PVALEFA0A1B0GWK0 134 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 A0A1W2PPB8 328 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 A0A1W2PRS3 328 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 CLPSL1A2RUU4 121 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 ZNF98A6NK75 572 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 KIR3DP1A8MWS1 328 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 CLDN34H7C241 214 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 TXNDC9O14530 226 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 RFXANKO14593 260 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 PFDN6O15212 129 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 PSIP1O75475 530 aaKnown RBP2.62□□□□□ -1.99
LIMA1-205ENST00000550592 IGKV1-39P01597 117 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 MAS1P04201 325 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 IGKV1D-39P04432 117 aa2.62□□□□□ -1.99
LIMA1-205ENST00000550592 IFNA16P05015 189 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms